Contact Us / Request a Quote Download Manuals
Advanced Cell Diagnostics Advanced Cell Diagnostics

Search form

Please sign in
  • Log In
  • Register
  • How to Order
  • What to Buy
0 My Cart
X

You have no items in your shopping cart.

Menu
X
  • Products +
    RNAscope™/BaseScope™/ miRNAscope™
    +
    • Assay Selection Guide
    Target Probes
    +
    • All About Probes
    • Catalog Probes
    • Probe Sets
    • New Probe Request
    Manual Assays
    +
    RNAscope™ Chromogenic
    • Overview
    • RNAscope™ 2.5 HD Assay-Brown
    • RNAscope™ 2.5 HD Assay-Red
    • RNAscope™ 2.5 HD Duplex Assay
    RNAscope™ Multiplex Fluorescent
    • Overview
    • RNAscope™ HiPlex v2 Assay
    • RNAscope™ Multiplex Fluorescent V2
    BaseScope™
    • Overview
    • BaseScope™ Assay Red
    • BaseScope™ Duplex Assay
    miRNAscope™
    • Overview
    • miRNAscope™ Assay red
    • RNAscope™ Plus smRNA-RNA Assay
    DNAscope™
    • Overview
    • DNAscope™ Duplex Assay
    Automated Assays
    +
    For Lunaphore COMET™
    • RNAscope™ HiPlex Pro for COMET™
    For Leica systems
    • Overview
    • RNAscope™ 2.5 LS Assay-Brown
    • RNAscope™ 2.5 LS Assay-Red
    • RNAscope™ 2.5 LS Duplex Assay
    • RNAscope™ Multiomic LS Assay
    • RNAscope™ 2.5 LS Fluorescent Multiplex Assay
    • RNAscope™ 2.5 LSx Reagent Kit-BROWN
    • RNAscope™ 2.5 LSx Reagent Kit-RED
    • BaseScope™ LS Reagent Kit – RED
    • miRNAscope LS Reagent Kit Red
    • RNAscope™ Plus smRNA-RNA LS Assay
    Roche DISCOVERY ULTRA system
    • Overview
    • RNAscope™ VS Universal HRP
    • RNAscope™ VS Universal AP
    • RNAscope™ VS Duplex Assay
    • BaseScope™ VS Reagent Kit – RED
    RNA-Protein Co-Detection Assay
    +
    • RNAscope HiPlex-IMC™ Co-Detection
    • Integrated Codetection Assay
    • Sequential RNA Protein Detection
    Software
    +
    • Overview
    • Aperio RNA ISH Algorithm
    • HALO® image analysis platform
    Controls & Accessories
    +
    • RNAscope™
    • BaseScope™
    • miRNAscope™
    • Accessories
    How to Order
    +
    • Ordering Instructions
    • What to Buy
  • Services +
    Professional Assay Services
    +
    • Our Services
    • Multiomic Services
    • Biomarker Assay Development
    • Cell & Gene Therapy Services
    • Clinical Assay Development
    • Tissue Bank & Sample Procurement
    • Image Analysis
    Benefits
    +
    • Your Benefits
    • Certified Providers
    How to Order
    +
    • Ordering Process
    • Contact Services
  • Areas of Research +
    Most Popular
    +
    • COVID-19 Coronavirus
    • Single Cell Analysis
    • Whole-Mount
    • Anatomic Pathology Panels
    • Neuroscience
    • Inflammation
    • Gene Therapy/AAV
    • Stem Cell
    • Immuno-oncology
    • Liver Research
    • Cardiovascular & Skeletal Muscle Research
    Cell & Gene Therapy
    +
    • Gene Therapy
    • Gene Therapy/AAV
    • siRNA/ASO
    • Cell Therapy
    Cancer
    +
    • Breast Cancer
    • EGFRvIII Splice Variant
    • HPV Related Cancer
    • Immuno-oncology
    • Lung Cancer
    • PDx
    • Prostate Cancer
    • Point Mutation
    • CDR3 for TCR
    Viral
    +
    • COVID-19 Coronavirus
    • HIV & SIV
    • Infectious Disease
    • Zika Virus
    Pathways
    +
    • AKT
    • JAK STAT
    • WNT B-Catenin
    Neuroscience
    +
    Neuroscience
    • Neural Development
    • Neuronal Cell Types
    • Learning and Memory
    • G-protein-coupled Receptors & Ion Channels
    • Post-mortem Brain Tissue
    Other
    +
    • Circular RNA
    • Gene Fusions
    • HT Transcript Validation
    • Long Non-coding RNA
    • RNAseq Validation
    • Single Cell Analysis
    • Splice Variant
    • miRNA
    RNA & Protein
    +
    • Antibody Challenges
    • Dual ISH + IHC Methods
    • No Antibodies
    • RNA & Protein Analysis
    Customer Innovations
    +
    • Dual RNA+DNA ISH
    • Very old FFPE ISH
    • Wholemount ISH
    Animal Models
    +
    • Any Species
    • Mouse Model
    • Preclincal Safety
  • Technology +
    Overview
    +
    • How it Works
    • Data Image Gallery
    • Technology Video
    • Webinars
    RNA Detection
    +
    • Why RNA?
    • RNA ISH and IHC
    Pretreatment Options
    +
    • RNAscope™ Pretreatment
    • PretreatPro™
    Spotlights
    +
    • Researchers Spotlights
    • RNA & DNA
    • WISH
    • FFPE
    • Testimonials
    Publications, Guides & Posters
    +
    • Search publications
    • RNAscope™ Reference Guide
    • RNAscope™ Data Analysis Guide
    • Download RNAscope™ Posters
  • Support +
    Overview
    +
    • Get Started
    • How to Order
    • Distributors
    • Contact Support
    Troubleshooting
    +
    • Troubleshooting Guide
    • FAQs
    • User Manuals, SDS and Product Inserts
    • Documents and Downloads
    Imaging Resource
    +
    • Image Analysis
    • Image Registration Software
    • QuPath
    • HALO® image analysis platform
    Learn More
    +
    • Webinars
    • Training Videos
  • Partners +
    Partners
    +
    • Overview
    Partners Directory
    +
    Automation Partners
    • Leica Biosystem
    • Roche Diagnostics
    Workflow Partners
    • NanoString
    Software Partners
    • indica labs
    Become a Partner
    +
    • Learn How
  • Diagnostics +
    Diagnostics
    +
    • Diagnostics
    • Literature
    • Diagnostics ASR Probes
    • Diagnostics CE-IVD Probes
    • Diagnostics CE-IVD Detection
    • Companion Diagnostics
  • Image Calendar +
    Image Calendar
    +
    • Image Contest
    • Data Image Gallery
Search
    Refine Probe List

    Content for comparison

    Species

    • Mouse (320919) Apply Mouse filter
    • Human (293611) Apply Human filter
    • Other (131299) Apply Other filter
    • Rat (63465) Apply Rat filter
    • Zebrafish (54667) Apply Zebrafish filter
    • Monkey (43709) Apply Monkey filter
    • Pig (17303) Apply Pig filter
    • Dog (16085) Apply Dog filter
    • Rabbit (8222) Apply Rabbit filter
    • Felis catus (7033) Apply Felis catus filter
    • Bovine (6266) Apply Bovine filter
    • Callithrix jacchus (5027) Apply Callithrix jacchus filter
    • Ovis aries (3328) Apply Ovis aries filter
    • Anolis carolinensis (3027) Apply Anolis carolinensis filter
    • Mesocricetus auratus (3019) Apply Mesocricetus auratus filter
    • Octopus bimaculoides (2731) Apply Octopus bimaculoides filter
    • Salmo salar (2711) Apply Salmo salar filter
    • Astyanax mexicanus (2665) Apply Astyanax mexicanus filter
    • Heterocephalus glaber (2596) Apply Heterocephalus glaber filter
    • Aedes aegypti (2427) Apply Aedes aegypti filter
    • Pogona vitticeps (2245) Apply Pogona vitticeps filter
    • Sorghum bicolor (1880) Apply Sorghum bicolor filter
    • Anopheles gambiae str. PEST (1759) Apply Anopheles gambiae str. PEST filter
    • Oryzias latipes (1746) Apply Oryzias latipes filter
    • Trichoplax adhaerens (1720) Apply Trichoplax adhaerens filter
    • Xenopus laevis (1534) Apply Xenopus laevis filter
    • Human papillomavirus (1523) Apply Human papillomavirus filter
    • Human herpesvirus (1465) Apply Human herpesvirus filter
    • Other virus (1461) Apply Other virus filter
    • Ixodes scapularis (1395) Apply Ixodes scapularis filter
    • Oncorhynchus mykiss (1393) Apply Oncorhynchus mykiss filter
    • Macaca nemestrina (1310) Apply Macaca nemestrina filter
    • Human immunodeficiency virus 1 (1303) Apply Human immunodeficiency virus 1 filter
    • Ginglymostoma cirratum (1163) Apply Ginglymostoma cirratum filter
    • Hepatitis B virus (1141) Apply Hepatitis B virus filter
    • Xenopus tropicalis (1138) Apply Xenopus tropicalis filter
    • Peromyscus maniculatus bairdii (1114) Apply Peromyscus maniculatus bairdii filter
    • Serinus canaria (1038) Apply Serinus canaria filter
    • Ictidomys tridecemlineatus (1028) Apply Ictidomys tridecemlineatus filter
    • Microtus ochrogaster (1024) Apply Microtus ochrogaster filter
    • Nothobranchius furzeri (1001) Apply Nothobranchius furzeri filter
    • synthetic construct (879) Apply synthetic construct filter
    • Gasterosteus aculeatus (818) Apply Gasterosteus aculeatus filter
    • Lonchura striata domestica (805) Apply Lonchura striata domestica filter
    • Hippocampus comes (768) Apply Hippocampus comes filter
    • Monodelphis domestica (694) Apply Monodelphis domestica filter
    • Rousettus aegyptiacus (639) Apply Rousettus aegyptiacus filter
    • Tupaia chinensis (617) Apply Tupaia chinensis filter
    • Anopheles gambiae (612) Apply Anopheles gambiae filter
    • Meriones unguiculatus (583) Apply Meriones unguiculatus filter

    Gene

    • PPIB (2561) Apply PPIB filter
    • TBD (1462) Apply TBD filter
    • Bdnf (1374) Apply Bdnf filter
    • GAPDH (1320) Apply GAPDH filter
    • Htt (1318) Apply Htt filter
    • UBC (1313) Apply UBC filter
    • Slc17a6 (1162) Apply Slc17a6 filter
    • FOS (1149) Apply FOS filter
    • Gad1 (1096) Apply Gad1 filter
    • Il10 (1077) Apply Il10 filter
    • CD4 (1066) Apply CD4 filter
    • POLR2A (1063) Apply POLR2A filter
    • ESR1 (1025) Apply ESR1 filter
    • AR (989) Apply AR filter
    • Vegfa (885) Apply Vegfa filter
    • Tnf (884) Apply Tnf filter
    • Lgr5 (875) Apply Lgr5 filter
    • Oxtr (868) Apply Oxtr filter
    • Ifng (851) Apply Ifng filter
    • NTRK2 (846) Apply NTRK2 filter
    • Ace2 (835) Apply Ace2 filter
    • DRD2 (824) Apply DRD2 filter
    • TGFB1 (822) Apply TGFB1 filter
    • Slc17a7 (808) Apply Slc17a7 filter
    • Rbfox3 (806) Apply Rbfox3 filter
    • LEPR (804) Apply LEPR filter
    • Nrg1 (791) Apply Nrg1 filter
    • OPRM1 (786) Apply OPRM1 filter
    • GFAP (784) Apply GFAP filter
    • PDGFRA (774) Apply PDGFRA filter
    • IL6 (751) Apply IL6 filter
    • ACTB (745) Apply ACTB filter
    • Sox9 (745) Apply Sox9 filter
    • Chat (731) Apply Chat filter
    • DRD1 (730) Apply DRD1 filter
    • GLP1R (728) Apply GLP1R filter
    • NP (728) Apply NP filter
    • Cd8a (727) Apply Cd8a filter
    • PECAM1 (725) Apply PECAM1 filter
    • MAPT (723) Apply MAPT filter
    • COL1A1 (703) Apply COL1A1 filter
    • ACTA2 (701) Apply ACTA2 filter
    • CD3E (694) Apply CD3E filter
    • TRPA1 (688) Apply TRPA1 filter
    • CDKN1A (670) Apply CDKN1A filter
    • S (658) Apply S filter
    • Sst (650) Apply Sst filter
    • Piezo2 (643) Apply Piezo2 filter
    • 16SrRNA (638) Apply 16SrRNA filter
    • CD68 (615) Apply CD68 filter

    Platform

    • Manual Assay RNAscope HiPlex (511449) Apply Manual Assay RNAscope HiPlex filter
    • Automated Assay for Leica Systems - RNAscope (128999) Apply Automated Assay for Leica Systems - RNAscope filter
    • Manual Assay RNAscope (70981) Apply Manual Assay RNAscope filter
    • Automated Assay for Ventana Systems - RNAscope (36105) Apply Automated Assay for Ventana Systems - RNAscope filter
    • Manual Assay BaseScope (5508) Apply Manual Assay BaseScope filter
    • Manual Assay miRNAscope (5124) Apply Manual Assay miRNAscope filter
    • Automated Assay for Leica Systems - miRNAscope (4930) Apply Automated Assay for Leica Systems - miRNAscope filter
    • Automated Assay for Leica Systems - BaseScope (4611) Apply Automated Assay for Leica Systems - BaseScope filter
    • Automated Assay for Ventana System - BaseScope (4574) Apply Automated Assay for Ventana System - BaseScope filter
    • Automated Assay for Ventana Systems - miRNAscope (4077) Apply Automated Assay for Ventana Systems - miRNAscope filter
    • Manual Assay DNAscope (227) Apply Manual Assay DNAscope filter
    • Manual Assay 2.5 (9) Apply Manual Assay 2.5 filter
    • T3 (3) Apply T3 filter
    • T4 (3) Apply T4 filter
    • T8 (3) Apply T8 filter
    • T1 (3) Apply T1 filter
    • T10 (3) Apply T10 filter
    • Manual Assay HiPlex (2) Apply Manual Assay HiPlex filter
    • T2 (2) Apply T2 filter
    • T7 (2) Apply T7 filter
    • T9 (2) Apply T9 filter
    • Automated Assay for Leica Systems (LS 2.5) (1) Apply Automated Assay for Leica Systems (LS 2.5) filter
    • T5 (1) Apply T5 filter
    • T6 (1) Apply T6 filter
    • T11 (1) Apply T11 filter
    • T12 (1) Apply T12 filter

    Channel

    • 1 (158789) Apply 1 filter
    • 2 (145194) Apply 2 filter
    • 3 (93691) Apply 3 filter
    • 4 (93473) Apply 4 filter
    • 6 (46553) Apply 6 filter
    • 5 (36684) Apply 5 filter
    • 8 (82) Apply 8 filter
    • 9 (76) Apply 9 filter
    • 7 (72) Apply 7 filter
    • 11 (67) Apply 11 filter
    • 10 (58) Apply 10 filter
    • 12 (50) Apply 12 filter

    HiPlex Channel

    • T1 (85058) Apply T1 filter
    • T10 (85051) Apply T10 filter
    • T12 (85050) Apply T12 filter
    • T11 (85039) Apply T11 filter
    • T9 (82563) Apply T9 filter
    • T8 (82560) Apply T8 filter
    • T4 (82558) Apply T4 filter
    • T2 (82557) Apply T2 filter
    • T7 (82553) Apply T7 filter
    • T3 (82546) Apply T3 filter
    • T6 (82546) Apply T6 filter
    • T5 (82540) Apply T5 filter
    • S1 (32) Apply S1 filter
    • 8 (17) Apply 8 filter
    • 1 (1) Apply 1 filter
    • 10 (1) Apply 10 filter
    • 6 (1) Apply 6 filter

    Product

    • RNAscope Multiplex Fluorescent Assay (1035) Apply RNAscope Multiplex Fluorescent Assay filter
    • RNAscope (998) Apply RNAscope filter
    • RNAscope Fluorescent Multiplex Assay (732) Apply RNAscope Fluorescent Multiplex Assay filter
    • RNAscope 2.5 HD Red assay (704) Apply RNAscope 2.5 HD Red assay filter
    • RNAscope 2.0 Assay (497) Apply RNAscope 2.0 Assay filter
    • RNAscope 2.5 HD Brown Assay (293) Apply RNAscope 2.5 HD Brown Assay filter
    • TBD (193) Apply TBD filter
    • RNAscope 2.5 LS Assay (191) Apply RNAscope 2.5 LS Assay filter
    • RNAscope 2.5 HD Duplex (160) Apply RNAscope 2.5 HD Duplex filter
    • RNAscope 2.5 HD Reagent Kit - BROWN (108) Apply RNAscope 2.5 HD Reagent Kit - BROWN filter
    • RNAscope Multiplex Fluorescent v2 (97) Apply RNAscope Multiplex Fluorescent v2 filter
    • BASEscope Assay RED (91) Apply BASEscope Assay RED filter
    • RNAscope 2.5 VS Assay (85) Apply RNAscope 2.5 VS Assay filter
    • Basescope (53) Apply Basescope filter
    • RNAscope HiPlex v2 assay (30) Apply RNAscope HiPlex v2 assay filter
    • miRNAscope (26) Apply miRNAscope filter
    • DNAscope HD Duplex Reagent Kit (15) Apply DNAscope HD Duplex Reagent Kit filter
    • RNAscope 2.5 HD duplex reagent kit (13) Apply RNAscope 2.5 HD duplex reagent kit filter
    • BaseScope Duplex Assay (12) Apply BaseScope Duplex Assay filter
    • RNAscope Multiplex fluorescent reagent kit v2 (6) Apply RNAscope Multiplex fluorescent reagent kit v2 filter
    • RNAscope Fluorescent Multiplex Reagent kit (5) Apply RNAscope Fluorescent Multiplex Reagent kit filter
    • RNAscope ISH Probe High Risk HPV (5) Apply RNAscope ISH Probe High Risk HPV filter
    • CTCscope (4) Apply CTCscope filter
    • RNAscope 2.5 HD Reagent Kit (4) Apply RNAscope 2.5 HD Reagent Kit filter
    • RNAscope HiPlex12 Reagents Kit (3) Apply RNAscope HiPlex12 Reagents Kit filter
    • DNAscope Duplex Assay (2) Apply DNAscope Duplex Assay filter
    • RNAscope 2.5 HD Assay (2) Apply RNAscope 2.5 HD Assay filter
    • RNAscope 2.5 LS Assay - RED (2) Apply RNAscope 2.5 LS Assay - RED filter
    • RNAscope Multiplex Fluorescent Assay v2 (2) Apply RNAscope Multiplex Fluorescent Assay v2 filter
    • BOND RNAscope Brown Detection (1) Apply BOND RNAscope Brown Detection filter
    • HybEZ Hybridization System (1) Apply HybEZ Hybridization System filter
    • miRNAscope Assay Red (1) Apply miRNAscope Assay Red filter
    • RNA-Protein CO-Detection Ancillary Kit (1) Apply RNA-Protein CO-Detection Ancillary Kit filter
    • RNAscope 2.0 HD Assay - Chromogenic (1) Apply RNAscope 2.0 HD Assay - Chromogenic filter
    • RNAscope 2.5 HD- Red (1) Apply RNAscope 2.5 HD- Red filter
    • RNAscope 2.5 LS Reagent Kits (1) Apply RNAscope 2.5 LS Reagent Kits filter
    • RNAScope HiPlex assay (1) Apply RNAScope HiPlex assay filter
    • RNAscope HiPlex Image Registration Software (1) Apply RNAscope HiPlex Image Registration Software filter
    • RNAscope LS Multiplex Fluorescent Assay (1) Apply RNAscope LS Multiplex Fluorescent Assay filter
    • RNAscope Multiplex Fluorescent Reagent Kit V3 (1) Apply RNAscope Multiplex Fluorescent Reagent Kit V3 filter
    • RNAscope Multiplex Fluorescent Reagent Kit v4 (1) Apply RNAscope Multiplex Fluorescent Reagent Kit v4 filter
    • RNAscope Multiplex Fluorescent v1 (1) Apply RNAscope Multiplex Fluorescent v1 filter
    • RNAscope Target Retrieval Reagents (1) Apply RNAscope Target Retrieval Reagents filter

    Research area

    • Neuroscience (1849) Apply Neuroscience filter
    • Cancer (1385) Apply Cancer filter
    • Development (509) Apply Development filter
    • Inflammation (472) Apply Inflammation filter
    • Infectious Disease (410) Apply Infectious Disease filter
    • Other (406) Apply Other filter
    • Stem Cells (258) Apply Stem Cells filter
    • Covid (237) Apply Covid filter
    • Infectious (220) Apply Infectious filter
    • HPV (187) Apply HPV filter
    • lncRNA (135) Apply lncRNA filter
    • Metabolism (91) Apply Metabolism filter
    • Developmental (83) Apply Developmental filter
    • Stem cell (78) Apply Stem cell filter
    • Immunotherapy (72) Apply Immunotherapy filter
    • Other: Methods (67) Apply Other: Methods filter
    • HIV (64) Apply HIV filter
    • CGT (62) Apply CGT filter
    • Pain (62) Apply Pain filter
    • diabetes (57) Apply diabetes filter
    • LncRNAs (46) Apply LncRNAs filter
    • Aging (43) Apply Aging filter
    • Other: Heart (40) Apply Other: Heart filter
    • Reproduction (38) Apply Reproduction filter
    • Endocrinology (34) Apply Endocrinology filter
    • Other: Metabolism (32) Apply Other: Metabolism filter
    • Obesity (29) Apply Obesity filter
    • Other: Lung (29) Apply Other: Lung filter
    • Behavior (27) Apply Behavior filter
    • Kidney (27) Apply Kidney filter
    • Other: Kidney (27) Apply Other: Kidney filter
    • Alzheimer's Disease (26) Apply Alzheimer's Disease filter
    • Bone (24) Apply Bone filter
    • Stress (21) Apply Stress filter
    • Other: Zoological Disease (20) Apply Other: Zoological Disease filter
    • Regeneration (20) Apply Regeneration filter
    • Skin (20) Apply Skin filter
    • Heart (19) Apply Heart filter
    • Liver (19) Apply Liver filter
    • Lung (19) Apply Lung filter
    • Fibrosis (17) Apply Fibrosis filter
    • Other: Liver (17) Apply Other: Liver filter
    • Psychiatry (17) Apply Psychiatry filter
    • behavioral (16) Apply behavioral filter
    • Other: Endocrinology (16) Apply Other: Endocrinology filter
    • Other: Skin (16) Apply Other: Skin filter
    • Injury (15) Apply Injury filter
    • Anxiety (14) Apply Anxiety filter
    • Memory (14) Apply Memory filter
    • Reproductive Biology (14) Apply Reproductive Biology filter

    Product sub type

    • Target Probes (256568) Apply Target Probes filter
    • Control Probe - Automated Leica (409) Apply Control Probe - Automated Leica filter
    • Control Probe - Automated Leica Multiplex (284) Apply Control Probe - Automated Leica Multiplex filter
    • Control Probe - Automated Leica Duplex (168) Apply Control Probe - Automated Leica Duplex filter
    • Control Probe- Manual RNAscope Multiplex (148) Apply Control Probe- Manual RNAscope Multiplex filter
    • Control Probe - Automated Ventana (143) Apply Control Probe - Automated Ventana filter
    • Control Probe - Manual RNAscope Singleplex (142) Apply Control Probe - Manual RNAscope Singleplex filter
    • Control Probe - Manual RNAscope Duplex (137) Apply Control Probe - Manual RNAscope Duplex filter
    • Control Probe (73) Apply Control Probe filter
    • Control Probe - Manual BaseScope Singleplex (51) Apply Control Probe - Manual BaseScope Singleplex filter
    • Control Probe - VS BaseScope Singleplex (41) Apply Control Probe - VS BaseScope Singleplex filter
    • Control Probe - LS BaseScope Singleplex (40) Apply Control Probe - LS BaseScope Singleplex filter
    • L-HBsAG (15) Apply L-HBsAG filter
    • Cancer (13) Apply Cancer filter
    • Automated Assay 2.5: Leica System (8) Apply Automated Assay 2.5: Leica System filter
    • Control Probe- Manual BaseScope Duplex (8) Apply Control Probe- Manual BaseScope Duplex filter
    • 1765 (8) Apply 1765 filter
    • 1379 (8) Apply 1379 filter
    • 2184 (8) Apply 2184 filter
    • 38322 (8) Apply 38322 filter
    • Manual Assay 2.5: Pretreatment Reagents (5) Apply Manual Assay 2.5: Pretreatment Reagents filter
    • Controls: Manual Probes (5) Apply Controls: Manual Probes filter
    • Control Probe- Manual RNAscope HiPlex (5) Apply Control Probe- Manual RNAscope HiPlex filter
    • Manual Assay RNAscope Brown (4) Apply Manual Assay RNAscope Brown filter
    • Manual Assay RNAscope Duplex (4) Apply Manual Assay RNAscope Duplex filter
    • Manual Assay RNAscope Multiplex (4) Apply Manual Assay RNAscope Multiplex filter
    • Manual Assay BaseScope Red (4) Apply Manual Assay BaseScope Red filter
    • IA: Other (4) Apply IA: Other filter
    • Control Probe - Manual BaseScope Duplex (4) Apply Control Probe - Manual BaseScope Duplex filter
    • Manual Assay miRNAscope Red (4) Apply Manual Assay miRNAscope Red filter
    • Automated Assay 2.5: Ventana System (3) Apply Automated Assay 2.5: Ventana System filter
    • IA: Other Accessories (3) Apply IA: Other Accessories filter
    • Control Probe - Automated Ventana Duplex (3) Apply Control Probe - Automated Ventana Duplex filter
    • Manual Assay BaseScope Duplex (3) Apply Manual Assay BaseScope Duplex filter
    • Manual Assay RNAscope Red (2) Apply Manual Assay RNAscope Red filter
    • Controls: Control Slides (2) Apply Controls: Control Slides filter
    • Control Probe- Manual BaseScope Singleplex (2) Apply Control Probe- Manual BaseScope Singleplex filter
    • Control Probe - Manual BaseScope™Singleplex (2) Apply Control Probe - Manual BaseScope™Singleplex filter
    • Manual Assay: Accessory Reagent (1) Apply Manual Assay: Accessory Reagent filter
    • Accessory Reagent (1) Apply Accessory Reagent filter
    • Controls: Manual RNAscope Multiplex (1) Apply Controls: Manual RNAscope Multiplex filter
    • IA: HybEZ (1) Apply IA: HybEZ filter
    • Automated Assay BaseScope: LS (1) Apply Automated Assay BaseScope: LS filter
    • Automated Assay BaseScope: VS (1) Apply Automated Assay BaseScope: VS filter
    • Software: RNAscope HiPlex Image Registration (1) Apply Software: RNAscope HiPlex Image Registration filter
    • miRNAscope Automated Assay: Leica System (1) Apply miRNAscope Automated Assay: Leica System filter
    • Automated Assay: VS (1) Apply Automated Assay: VS filter
    • Control Probe - VS BaseScope™Singleplex (1) Apply Control Probe - VS BaseScope™Singleplex filter
    • Controls:2.5VS Probes (1) Apply Controls:2.5VS Probes filter
    • Control Probe - Manual RNAscope Multiplex (1) Apply Control Probe - Manual RNAscope Multiplex filter

    Sample Compatibility

    • Cell pellets (49) Apply Cell pellets filter
    • FFPE (41) Apply FFPE filter
    • Fixed frozen tissue (31) Apply Fixed frozen tissue filter
    • TMA (31) Apply TMA filter
    • Adherent cells (26) Apply Adherent cells filter
    • Freshfrozen tissue (18) Apply Freshfrozen tissue filter
    • Fresh frozen tissue (13) Apply Fresh frozen tissue filter
    • Cell Cultures (12) Apply Cell Cultures filter
    • TMA(Tissue Microarray) (9) Apply TMA(Tissue Microarray) filter
    • FFPE,Freshfrozen tissue,Fixed frozen tissue,TMA,Cell pellets,Adherent cells (7) Apply FFPE,Freshfrozen tissue,Fixed frozen tissue,TMA,Cell pellets,Adherent cells filter
    • CTC (4) Apply CTC filter
    • PBMC's (4) Apply PBMC's filter
    • Adherent or Cultured Cells (1) Apply Adherent or Cultured Cells filter
    • Fixed frozen (1) Apply Fixed frozen filter
    • FFPE,TMA (1) Apply FFPE,TMA filter
    • Fixed frozen tissues (for chromogenic assays) (1) Apply Fixed frozen tissues (for chromogenic assays) filter

    Category

    • Publications (7110) Apply Publications filter

    Application

    • Cancer (139875) Apply Cancer filter
    • Neuroscience (51010) Apply Neuroscience filter
    • Cancer, Neuroscience (32227) Apply Cancer, Neuroscience filter
    • Non-coding RNA (24365) Apply Non-coding RNA filter
    • Cancer, Inflammation (16436) Apply Cancer, Inflammation filter
    • Cancer, Inflammation, Neuroscience (12591) Apply Cancer, Inflammation, Neuroscience filter
    • Inflammation (9879) Apply Inflammation filter
    • Cancer, Stem Cell (7932) Apply Cancer, Stem Cell filter
    • Cancer, Neuroscience, Stem Cell (7028) Apply Cancer, Neuroscience, Stem Cell filter
    • Cancer, Immunotherapy, Inflammation, Neuroscience, Stem Cell (6854) Apply Cancer, Immunotherapy, Inflammation, Neuroscience, Stem Cell filter
    • Cancer, Inflammation, Neuroscience, Stem Cell (5424) Apply Cancer, Inflammation, Neuroscience, Stem Cell filter
    • Immunotherapy (5368) Apply Immunotherapy filter
    • Cancer, Immunotherapy (3866) Apply Cancer, Immunotherapy filter
    • Stem Cell (3385) Apply Stem Cell filter
    • Cancer, Immunotherapy, Neuroscience, Stem Cell (3050) Apply Cancer, Immunotherapy, Neuroscience, Stem Cell filter
    • Cancer, Immunotherapy, Inflammation (2844) Apply Cancer, Immunotherapy, Inflammation filter
    • Cancer, Immunotherapy, Inflammation, Neuroscience (1878) Apply Cancer, Immunotherapy, Inflammation, Neuroscience filter
    • Cancer, Immunotherapy, Neuroscience (1786) Apply Cancer, Immunotherapy, Neuroscience filter
    • Inflammation, Neuroscience (1499) Apply Inflammation, Neuroscience filter
    • Cancer, Non-coding RNA (1142) Apply Cancer, Non-coding RNA filter
    • Cancer, Immunotherapy, Inflammation, Stem Cell (1021) Apply Cancer, Immunotherapy, Inflammation, Stem Cell filter
    • Cancer,Neuroscience (940) Apply Cancer,Neuroscience filter
    • Cancer,Inflammation (777) Apply Cancer,Inflammation filter
    • Cancer, Inflammation, Stem Cell (594) Apply Cancer, Inflammation, Stem Cell filter
    • Immunotherapy, Inflammation (560) Apply Immunotherapy, Inflammation filter
    • Cancer,Inflammation,Neuroscience (424) Apply Cancer,Inflammation,Neuroscience filter
    • Cancer,Neuroscience,Stem Cell (317) Apply Cancer,Neuroscience,Stem Cell filter
    • Cancer, Immunotherapy, Stem Cell (295) Apply Cancer, Immunotherapy, Stem Cell filter
    • Cancer,Inflammation,Neuroscience,Stem Cell (259) Apply Cancer,Inflammation,Neuroscience,Stem Cell filter
    • Cancer,Stem Cell (237) Apply Cancer,Stem Cell filter
    • Cancer, Neuroscience, Neuroscience (221) Apply Cancer, Neuroscience, Neuroscience filter
    • Cancer,Immunotherapy,Inflammation,Neuroscience,Stem Cell (211) Apply Cancer,Immunotherapy,Inflammation,Neuroscience,Stem Cell filter
    • Cancer,Immunotherapy (206) Apply Cancer,Immunotherapy filter
    • Cancer,Immunotherapy,Inflammation (130) Apply Cancer,Immunotherapy,Inflammation filter
    • Neuroscience, Neuroscience (119) Apply Neuroscience, Neuroscience filter
    • Cancer,Immunotherapy,Neuroscience (113) Apply Cancer,Immunotherapy,Neuroscience filter
    • L glycoprotein (112) Apply L glycoprotein filter
    • Immunotherapy, Neuroscience (99) Apply Immunotherapy, Neuroscience filter
    • Cancer,Immunotherapy,Inflammation,Neuroscience (82) Apply Cancer,Immunotherapy,Inflammation,Neuroscience filter
    • Cancer,Immunotherapy,Neuroscience,Stem Cell (80) Apply Cancer,Immunotherapy,Neuroscience,Stem Cell filter
    • Immunotherapy,Inflammation (51) Apply Immunotherapy,Inflammation filter
    • Cancer,Non-coding RNA (48) Apply Cancer,Non-coding RNA filter
    • 4863 (41) Apply 4863 filter
    • Cancer, Neuroscience, Non-coding RNA (35) Apply Cancer, Neuroscience, Non-coding RNA filter
    • Inflammation,Neuroscience (33) Apply Inflammation,Neuroscience filter
    • HAdVC_gp16,HAdVCgp31 (32) Apply HAdVC_gp16,HAdVCgp31 filter
    • Cancer, Inflammation, Neuroscience, Non-coding RNA (31) Apply Cancer, Inflammation, Neuroscience, Non-coding RNA filter
    • Cancer,Immunotherapy,Inflammation,Stem Cell (30) Apply Cancer,Immunotherapy,Inflammation,Stem Cell filter
    • Inflammation, Non-coding RNA (30) Apply Inflammation, Non-coding RNA filter
    • Neuroscience, Non-coding RNA (29) Apply Neuroscience, Non-coding RNA filter
    Intact piRNA pathway prevents L1 mobilization in male meiosis

    PNAS

    2017 May 24

    Newkirk SJ, Lee S, Grandi FC, Gaysinskaya V, Rosser JM, Vanden Berg N, Hogarth CA, Marchetto MCN, Muotri AR, Griswold MD, Ye P, Bortvin A, Gage FH, Boeke JD, Ana W.
    PMID: 28630288 | DOI: 10.1073/pnas.1701069114

    The PIWI-interacting RNA (piRNA) pathway is essential for retrotransposon silencing. In piRNA-deficient mice, L1-overexpressing male germ cells exhibit excessive DNA damage and meiotic defects. It remains unknown whether L1 expression simply highlights piRNA deficiency or actually drives the germ-cell demise. Specifically, the sheer abundance of genomic L1 copies prevents reliable quantification of new insertions. Here, we developed a codon-optimized L1 transgene that is controlled by an endogenous mouse L1 promoter. Importantly, DNA methylation dynamics of a single-copy transgene were indistinguishable from those of endogenous L1s. Analysis of Mov10l1-/- testes established that de novo methylation of the L1 transgene required the intact piRNA pathway. Consistent with loss of DNA methylation and programmed reduction of H3K9me2 at meiotic onset, the transgene showed 1,400-fold increase in RNA expression and consequently 70-fold increase in retrotransposition in postnatal day 14 Mov10l1-/- germ cells compared with the wild-type. Analysis of adult Mov10l1-/- germ-cell fractions indicated a stage-specific increase of retrotransposition in the early meiotic prophase. However, extrapolation of the transgene data to endogenous L1s suggests that it is unlikely insertional mutagenesis alone accounts for the Mov10l1-/- phenotype. Indeed, pharmacological inhibition of reverse transcription did not rescue the meiotic defect. Cumulatively, these results establish the occurrence of productive L1 mobilization in the absence of an intact piRNA pathway but leave open the possibility of processes preceding L1 integration in triggering meiotic checkpoints and germ-cell death. Additionally, our data suggest that many heritable L1 insertions originate from individuals with partially compromised piRNA defense.

    Resolving in vivo gene expression during collective cell migration using an integrated RNAscope, immunohistochemistry and tissue clearing method

    Mechanisms of Development

    2017 Jun 17

    Morrison JA, McKinney MC, Kulesa PM.
    PMID: 28633909 | DOI: 10.1016/j.mod.2017.06.004

    During collective cell migration individual cells display diverse behaviors that complicate our understanding of group cell decisions of direction and cohesion. In vivo gene and protein expression analyses would shed light on the underlying molecular choreography. However, this information has been limited due to difficulties to integrate single cell detection methods and the simultaneous readout of signals deep within the embryo. Here, we optimize and integrate multiplex fluorescence in situ hybridization by RNAscope, immunohistochemistry, and tissue clearing to visualize transcript and protein localization within single cells deep within intact chick embryos. Using standard confocal microscopy, we visualize the mRNA expression of up to 3 genes simultaneously within protein labeled HNK1-positive migrating cranial neural crest cells within 2day old cleared chick embryos. Gene expression differences measured between adjacent cells or within subregions are quantified using spot counting and polyline kymograph methods, respectively. This optimization and integration of methods provide an improved 3D in vivo molecular interrogation of collective cell migration and foundation to broaden into a wider range of embryo and adult model systems.

    Rationally Engineered AAV Capsids Improve Transduction and Volumetric Spread in the Central Nervous System

    Molecular Therapy: Nucleic Acid

    2017 Jun 21

    Kanaan NM, Sellnow RC, Boye SL, Coberly B, Bennett A, Agbandje-McKenna M, Sortwell CE, Hauswirth WW, Boye SE, Manfredsson FP.
    PMID: - | DOI: 10.1016/j.omtn.2017.06.011

    Adeno-associated virus (AAV) is the most common vector for clinical gene therapy of the central nervous system (CNS). This popularity originates from a high safety record and the longevity of transgene expression in neurons. Nevertheless, clinical efficacy for CNS indications is lacking, and one reason for this is the relatively limited spread and transduction efficacy in large regions of the human brain. Using rationally designed modifications of the capsid, novel AAV capsids have been generated which improve intracellular processing and result in increased transgene expression. Here, we sought to improve AAV-mediated neuronal transduction to minimize the existing limitations of CNS gene therapy. We investigated the efficacy of CNS transduction using a variety of tyrosine and threonine capsid mutants based on AAV 2, 5, and 8 capsids, as well as AAV2 mutants incapable of binding heparan sulfate (HS). We found that mutating several tyrosine residues on the AAV2 capsid significantly enhanced neuronal transduction in the striatum and hippocampus, and the ablation of HS binding also increased the volumetric spread of the vector. Interestingly, the analogous tyrosine substitutions on AAV5 and AAV8 capsids did not improve the efficacy of these serotypes. Our results demonstrate that the efficacy of CNS gene transfer can be significantly improved with minor changes to the AAV capsid and that the effect is serotype specific.

    Antagonistic modulation of NPY/AgRP and POMC neurons in the arcuate nucleus by noradrenalin.

    Elife.

    2017 Jun 20

    Paeger L, Karakasilioti I, Altmüller J, Frommolt P, Brüning J, Kloppenburg P.
    PMID: 28632132 | DOI: 10.7554/eLife.25770

    In the arcuate nucleus of the hypothalamus (ARH) satiety signaling (anorexigenic) pro-opiomelanocortin (POMC)-expressing and hunger signaling (orexigenic) agouti-related peptide (AgRP)-expressing neurons are key components of the neuronal circuits that control food intake and energy homeostasis. Here, we assessed whether the catecholamine noradrenalin directly modulates the activity of these neurons in mice. Perforated patch clamp recordings showed that noradrenalin changes the activity of these functionally antagonistic neurons in opposite ways, increasing the activity of the orexigenic NPY/AgRP neurons and decreasing the activity of the anorexigenic POMC neurons. Cell type-specific transcriptomics and pharmacological experiments revealed that the opposing effect on these neurons is mediated by the activation of excitatory α1A - and β- adrenergic receptors in NPY/AgRP neurons, while POMC neurons are inhibited via α2A - adrenergic receptors. Thus, the coordinated differential modulation of the key hypothalamic neurons in control of energy homeostasis assigns noradrenalin an important role to promote feeding.

    Gm7325 is MyoD-dependently expressed in activated muscle satellite cells.

    Biomed Res.

    2017 Jun 01

    Takei D, Miyuki N, So-Ichiro F, Masao D, Okamura H, Uezumi A, Zhang L, Yoshida M, Miyazato M, Ichimura A, Takeshima H.
    PMID: - | DOI: 10.2220/biomedres.38.215

    The Gm7325 gene, bioinformatically identified in the mouse genome, encodes a small protein but has not been characterized until recently. Our gene expression analysis revealed that Gm7325 transcription is remarkably upregulated in injured skeletal muscle tissues. Activated satellite cells and immature myotubes were densely decorated with positive signals for Gm7325 mRNA in in situ hybridization analysis, while no obvious signals were observed in quiescent satellite cells and mature myofibers. In the 5’-flanking regions of mouse Gm7325 and its human homologue, conserved E-box motifs for helix-loop-helix transcription factors are repeatedly arranged around the putative promoter regions. Reporter gene assays suggested that MyoD, a master transcription factor for myogenesis, binds to the conserved E-box motifs to activate Gm7325 expression. Therefore, Gm7325, as a novel MyoD-target gene, is specifically induced in activated satellite cells, and may have an important role in skeletal myogenesis.

    Mammary tumor-derived CCL2 enhances prometastatic systemic inflammation through upregulation of IL1β in tumor-associated macrophages

    OncoImmunology

    2017 Jun 19

    Kersten K, Coffelt SB, Hoogstraat M, Verstegen NJM, Vrijland K, Ciampricotti M, Doornebal CW, Hau CS, Wellenstein MD, Salvagno C, Doshi P, Lips EH, Wessels LFH, de Visser KE.
    PMID: - | DOI: 10.1080/2162402X.2017.1334744

    Patients with primary solid malignancies frequently exhibit signs of systemic inflammation. Notably, elevated levels of neutrophils and their associated soluble mediators are regularly observed in cancer patients, and correlate with reduced survival and increased metastasis formation. Recently, we demonstrated a mechanistic link between mammary tumor-induced IL17-producing γδ T cells, systemic expansion of immunosuppressive neutrophils and metastasis formation in a genetically engineered mouse model for invasive breast cancer. How tumors orchestrate this systemic inflammatory cascade to facilitate dissemination remains unclear. Here we show that activation of this cascade relies on CCL2-mediated induction of IL1β in tumor-associated macrophages. In line with these findings, expression of CCL2 positively correlates with IL1Β and macrophage markers in human breast tumors. We demonstrate that blockade of CCL2 in mammary tumor-bearing mice results in reduced IL17 production by γδ T cells, decreased neutrophil expansion and enhanced CD8+ T cell activity. These results highlight a new role for CCL2 in facilitating the breast cancer-induced pro-metastatic systemic inflammatory γδ T cell – IL17 – neutrophil axis.

    Genetic specification of left–right asymmetry in the diaphragm muscles and their motor innervation

    Elife.

    2017 Jun 22

    Charoy C, Dinvaut S, Chaix Y, Morlé L, Sanyas I, Bozon M, Kindbeiter K, Durand B, Skidmore JM, De Groef L, Seki M, Moons L, Ruhrberg C, Martin JF, Martin DM, Falk J, Castellani V.
    PMID: 28639940 | DOI: 10.7554/eLife.18481

    The diaphragm muscle is essential for breathing in mammals. Its asymmetric elevation during contraction correlates with morphological features suggestive of inherent left-right (L/R) asymmetry. Whether this asymmetry is due to L versus R differences in the muscle or in the phrenic nerve activity is unknown. Here, we have combined the analysis of genetically modified mouse models with transcriptomic analysis to show that both the diaphragm muscle and phrenic nerves have asymmetries, which can be established independently of each other during early embryogenesis in pathway instructed by Nodal, a morphogen that also conveys asymmetry in other organs. We further found that phrenic motoneurons receive an early L/R genetic imprint, with L versus R differences both in Slit/Robo signaling and MMP2 activity and in the contribution of both pathways to establish phrenic nerve asymmetry. Our study therefore demonstrates L-R imprinting of spinal motoneurons and describes how L/R modulation of axon guidance signaling helps to match neural circuit formation to organ asymmetry.

    Radiosensitization of adenoid cystic carcinoma with MDM2 inhibition

    Clin Cancer Res.

    2017 Jun 28

    Prabakaran PJ, Javaid AM, Swick AD, Werner LR, Nickel KP, Sampene E, Hu R, Ong IM, Bruce JY, Hartig GK, Wieland A, Canon J, Harari PM, Kimple RJ.
    PMID: 28659312 | DOI: 10.1158/1078-0432.CCR-17-0969

    Abstract

    PURPOSE:

    Adenoid cystic carcinoma (ACC) is a rare cancer arising from the major or minor salivary gland tissues of the head and neck. There are currently no approved systemic agents or known radiosensitizers for ACC. Unlike the more common head and neck squamous cell carcinomas that frequently harbor TP53 mutations, ACC contain TP53 mutations at a rate of <5%, rendering them an attractive target for MDM2 inhibition. <p>Experimental Design: We report the successful establishment and detailed characterization of a TP53-WT ACC patient derived xenograft (PDX) which retained the histologic features of the original patient tumor. We evaluated this model for response to the MDM2 inhibitor AMG 232 as monotherapy and in combination with radiation (RT).</p> <p>Results: AMG 232 monotherapy induced modest tumor growth inhibition and RT monotherapy induced a transient tumor growth delay in a dose dependent fashion. Strikingly, combination treatment of AMG 232 with RT (including low dose RT of 2 Gy/fraction) induced dramatic tumor response and high local tumor control rates three months following treatment. Post treatment analysis revealed that while both AMG 232 and RT alone induced TP53 tumor suppressive activities, combination therapy amplified this response with potent induction of apoptosis after combination treatment.</p> <p>Conclusions: These data identify that MDM2 inhibition can provide potent radiosensitization in TP53-WT ACC.  In light of the absence of effective systemic agents for ACC, the powerful response profile observed here suggests that clinical trial evaluation of this drug/RT combination may be warranted to improve local control in this challenging malignancy.

    E2F1-regulated long non-coding RNA RAD51-AS1 promotes cell cycle progression, inhibits apoptosis and predicts poor prognosis in epithelial ovarian cancer

    Sci Rep.

    2017 Jun 30

    Zhang X, Liu G, Qiu J, Zhang N, Ding J, Hua K.
    PMID: 28667302 | DOI: 10.1038/s41598-017-04736-z

    Long non-coding RNA RAD51 antisense RNA 1 (RAD51-AS1, also known as TODRA) has been shown to be down-regulated by E2F1, a key cell cycle and apoptosis regulator, in breast cancer. Little is known regarding the role of RAD51-AS1 in disease. Here, we investigate the role of RAD51-AS1 in epithelial ovarian cancer (EOC). Using luciferase reporter and chromatin immunoprecipitation experiments, we verified RAD51-AS1 as a target of E2F1 under negative regulation in EOC. We then examined RAD51-AS1 expression in EOC samples using in situ hybridization (ISH). RAD51-AS1 was localized to the nucleus and found to be a critical marker for clinical features that significantly correlated with poor survival in EOC patients. RAD51-AS1 was also an independent prognostic factor for EOC. Overexpression of RAD51-AS1promoted EOC cell proliferation, while silencing of RAD51-AS1 inhibited EOC cell proliferation, delayed cell cycle progression and promoted apoptosis in vitro and in vivo. RAD51-AS1 may participate in carcinogenesis via regulation of p53 and p53-related genes. Our study highlights the role of RAD51-AS1 as a prognostic marker of EOC. Based on its regulation of the tumor suppressor p53, RAD51-AS1-based therapy may represent a viable therapeutic option for EOC in the near future.

    Keratinocytes produce IL-17c to protect peripheral nervous systems during human HSV-2 reactivation

    J Exp Med. 

    2017 Jun 29

    Peng T, Chanthaphavong RS, Sun S, Trigilio JA, Phasouk K, Jin L, Layton ED, Li AZ, Correnti CE, De van der Schueren W, Vazquez J, O’Day DR, Glass IA, Knipe DM, Wald A, Corey L, Zhu J.
    PMID: 28663436 | DOI: 10.1084/jem.20160581

    Abstract

    Despite frequent herpes simplex virus (HSV) reactivation, peripheral nerve destruction and sensory anesthesia are rare. We discovered that skin biopsies obtained during asymptomatic human HSV-2 reactivation exhibit a higher density of nerve fibers relative to biopsies during virological and clinical quiescence. We evaluated the effects of HSV infection on keratinocytes, the initial target of HSV replication, to better understand this observation. Keratinocytes produced IL-17c during HSV-2 reactivation, and IL-17RE, an IL-17c-specific receptor, was expressed on nerve fibers in human skin and sensory neurons in dorsal root ganglia. In ex vivo experiments, exogenous human IL-17cprovided directional guidance and promoted neurite growth and branching in microfluidic devices. Exogenous murine IL-17c pretreatment reduced apoptosis in HSV-2-infected primary neurons. These results suggest that IL-17c is a neurotrophic cytokine that protects peripheralnerve systems during HSV reactivation. This mechanism could explain the lack of nerve damage from recurrent HSV infection and may provide insight to understanding and treating sensory peripheral neuropathies.

    Naturally Acquired Canine Herpesvirus-Associated Meningoencephalitis.

    Vet Pathol.

    2017 Jun 28

    Jager MC, Sloma EA, Shelton M, Miller AD.
    PMID: 28655291 | DOI: 10.1177/0300985817716263

    Canid alphaherpesvirus 1 (CHV) causes morbidity and mortality in susceptible puppies. While the neuropathology of experimentally infected puppies has been detailed, characterization of naturally acquired infections is limited. The aim of this study was to describe the histologic, immunohistochemical, and in situ hybridization features of CHV encephalitis in the dog. Six female and 11 male puppies ranging in age from stillborn to 57 days old were included. Histologically, lesions included multifocal glial nodules (16/17, 94%), meningeal infiltrates (15/17, 88%), and cerebellar cortical necrosis (6/9, 67%); however, robust inflammation was not a significant feature in any of the cases. Immunohistochemistry for CD3, CD20, MAC387, and Iba1 was performed. Although T cells predominated over B cells, the overall number of cells was small in all cases both within the glial nodules and the meninges. In 16 of 16 (100%) cases, glial nodules were diffusely immunoreactive for Iba1; however, limited or no immunoreactivity for MAC387 was present. In situ hybridization directed at the CHV thymidine kinase gene revealed CHV nucleic acid in the granule neurons of the cerebellar folia (8/9; 89%), endothelial cells in the meninges and parenchyma (12/17, 71%), and individual randomly distributed neurons (6/17, 35%). These results clarify the pathology of naturally acquired CHV infection and indicate that developing cerebellar granule neurons are an important site of viral replication.

    Transcriptomic Profiling of Posterior Polymorphous Corneal Dystrophy.

    Invest Ophthalmol Vis Sci.

    2017 Jun 01

    Chung DD, Frausto RF, Lin BR, Hanser EM, Cohen Z, Aldave AJ.
    PMID: 28654985 | DOI: 10.1167/iovs.17-21423

    Abstract

    PURPOSE:

    To investigate the molecular basis of posterior polymorphous corneal dystrophy (PPCD) by examining the PPCD transcriptome and the effect of decreased ZEB1 expression on corneal endothelial cell (CEnC) gene expression.

    METHODS:

    Next-generation RNA sequencing (RNA-seq) analyses of corneal endothelium from two PPCD-affected individuals (one with PPCD3 and one of unknown genetic cause) compared with two age-matched controls, and primary human CEnC (pHCEnC) transfected with siRNA-mediated ZEB1 knockdown. The expression of selected differentially expressed genes was validated by quantitative polymerase chain reaction (qPCR) and/or assessed by in situ hybridization in the corneal endothelium of four independent cases of PPCD (one with PPCD3 and three of unknown genetic cause).

    RESULTS:

    Expression of 16% and 46% of the 104 protein-coding genes specific to ex vivo corneal endothelium was lost in the endothelium of two individuals with PPCD. Thirty-two genes associated with ZEB1 and 3 genes (BMP4, CCND1, ZEB1) associated with OVOL2 were differentially expressed in the same direction in both individuals with PPCD. Immunohistochemistry staining and RNA-seq analyses demonstrated variable expression of type IV collagens in PPCD corneas. Decreasing ZEB1 expression in pHCEnC altered expression of 711 protein-coding genes, many of which are associated with canonical pathways regulating various cellular processes.

    CONCLUSIONS:

    Identification of the altered transcriptome in PPCD and in a cell-based model of PPCD provided insight into the molecular alterations characterizing PPCD. Further study of the differentially expressed genes associated with ZEB1 and OVOL2 is expected to identify candidate genes for individuals with PPCD and without a ZEB1 or OVOL2 mutation.

    Pages

    • « first
    • ‹ previous
    • …
    • 67
    • 68
    • 69
    • 70
    • 71
    • 72
    • 73
    • 74
    • 75
    • …
    • next ›
    • last »
    X
    Description
    sense
    Example: Hs-LAG3-sense
    Standard probes for RNA detection are in antisense. Sense probe is reverse complent to the corresponding antisense probe.
    Intron#
    Example: Mm-Htt-intron2
    Probe targets the indicated intron in the target gene, commonly used for pre-mRNA detection
    Pool/Pan
    Example: Hs-CD3-pool (Hs-CD3D, Hs-CD3E, Hs-CD3G)
    A mixture of multiple probe sets targeting multiple genes or transcripts
    No-XSp
    Example: Hs-PDGFB-No-XMm
    Does not cross detect with the species (Sp)
    XSp
    Example: Rn-Pde9a-XMm
    designed to cross detect with the species (Sp)
    O#
    Example: Mm-Islr-O1
    Alternative design targeting different regions of the same transcript or isoforms
    CDS
    Example: Hs-SLC31A-CDS
    Probe targets the protein-coding sequence only
    EnEmProbe targets exons n and m
    En-EmProbe targets region from exon n to exon m
    Retired Nomenclature
    tvn
    Example: Hs-LEPR-tv1
    Designed to target transcript variant n
    ORF
    Example: Hs-ACVRL1-ORF
    Probe targets open reading frame
    UTR
    Example: Hs-HTT-UTR-C3
    Probe targets the untranslated region (non-protein-coding region) only
    5UTR
    Example: Hs-GNRHR-5UTR
    Probe targets the 5' untranslated region only
    3UTR
    Example: Rn-Npy1r-3UTR
    Probe targets the 3' untranslated region only
    Pan
    Example: Pool
    A mixture of multiple probe sets targeting multiple genes or transcripts

    Enabling research, drug development (CDx) and diagnostics

    Contact Us
    • Toll-free in the US and Canada
    • +1877 576-3636
    • 
    • 
    • 
    Company
    • Overview
    • Leadership
    • Careers
    • Distributors
    • Quality
    • News & Events
    • Webinars
    • Patents
    Products
    • RNAscope or BaseScope
    • Target Probes
    • Controls
    • Manual assays
    • Automated Assays
    • Accessories
    • Software
    • How to Order
    Research
    • Popular Applications
    • Cancer
    • Viral
    • Pathways
    • Neuroscience
    • Other Applications
    • RNA & Protein
    • Customer Innovations
    • Animal Models
    Technology
    • Overview
    • RNA Detection
    • Spotlight Interviews
    • Publications & Guides
    Assay Services
    • Our Services
    • Biomarker Assay Development
    • Cell & Gene Therapy Services
    • Clinical Assay Development
    • Tissue Bank & Sample Procurement
    • Image Analysis
    • Your Benefits
    • How to Order
    Diagnostics
    • Diagnostics
    • Companion Diagnostics
    Support
    • Getting started
    • Contact Support
    • Troubleshooting Guide
    • FAQs
    • Manuals, SDS & Inserts
    • Downloads
    • Webinars
    • Training Videos

    Visit Bio-Techne and its other brands

    • bio-technie
    • protein
    • bio-spacific
    • rd
    • novus
    • tocris
    © 2025 Advanced Cell Diagnostics, Inc.
    • Terms and Conditions of Sale
    • Privacy Policy
    • Security
    • Email Preferences
    • 
    • 
    • 

    For Research Use Only. Not for diagnostic use. Refer to appropriate regulations. RNAscope is a registered trademark; and HybEZ, EZ-Batch and DNAscope are trademarks of Advanced Cell Diagnostics, Inc. in the United States and other countries. All rights reserved. ©2025 Advanced Cell Diagnostics, Inc.

     

    Contact Us / Request a Quote
    Download Manuals
    Request a PAS Project Consultation
    Order online at
    bio-techne.com
    OK
    X
    Contact Us

    Complete one of the three forms below and we will get back to you.

    For Quote Requests, please provide more details in the Contact Sales form below

    • Contact Sales
    • Contact Support
    • Contact Services
    • Offices

    Advanced Cell Diagnostics

    Our new headquarters office starting May 2016:

    7707 Gateway Blvd.  
    Newark, CA 94560
    Toll Free: 1 (877) 576-3636
    Phone: (510) 576-8800
    Fax: (510) 576-8798

     

    Bio-Techne

    19 Barton Lane  
    Abingdon Science Park
    Abingdon
    OX14 3NB
    United Kingdom
    Phone 2: +44 1235 529449
    Fax: +44 1235 533420

     

    Advanced Cell Diagnostics China

    20F, Tower 3,
    Raffles City Changning Office,
    1193 Changning Road, Shanghai 200051

    021-52293200
    info.cn@bio-techne.com
    Web: www.acdbio.com/cn

    For general information: Info.ACD@bio-techne.com
    For place an order: order.ACD@bio-techne.com
    For product support: support.ACD@bio-techne.com
    For career opportunities: hr.ACD@bio-techne.com

    See Distributors
    ×

    You have already Quick ordered an Item in your cart . If you want to add a new item , Quick ordered Item will be removed form your cart. Do You want to continue?

    OK Cancel
    Need help?

    How can we help you?