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Search

Probes for LONG

ACD can configure probes for the various manual and automated assays for LONG for RNAscope Assay, or for Basescope Assay compatible for your species of interest.

ACD’s data images for Long gene.

  • RNA expression of long gene in Human Colorectal cancer sample using RNAscope™ 2.5 HD Assay Brown

  • RNA expression of long gene in Human Gastric cancer sample using RNAscope™ 2.5 HD Assay Brown

  • RNA expression of long gene in Human Glioma sample using RNAscope™ 2.5 HD Assay Brown

  • RNA expression of long gene in Human Lung cancer sample using RNAscope™ 2.5 HD Assay Brown

  • RNA expression of long gene in Human ovarian cancer sample using RNAscope™ 2.5 HD Assay Brown

  • Expression of long in Human Prostate cancer sample using RNAscope™ 2.5 HD Assay Brown

  • Probes for Long (0)
  • Kits & Accessories (0)
  • Support & Documents (0)
  • Publications (3)
  • Image gallery (0)
Refine Probe List

Content for comparison

Gene

  • MALAT1 (7) Apply MALAT1 filter
  • HOTAIR (6) Apply HOTAIR filter
  • H19 (6) Apply H19 filter
  • Neat1 (4) Apply Neat1 filter
  • LINC00473 (3) Apply LINC00473 filter
  • PVT1 (2) Apply PVT1 filter
  • BCAR4 (2) Apply BCAR4 filter
  • (-) Remove GAS5 filter GAS5 (2)
  • TIE1 (2) Apply TIE1 filter
  • UCA1 (2) Apply UCA1 filter
  • SChLAP1 (2) Apply SChLAP1 filter
  • Pnky (2) Apply Pnky filter
  • RAD51-AS1 (2) Apply RAD51-AS1 filter
  • LINK-A (2) Apply LINK-A filter
  • ROR (2) Apply ROR filter
  • TBD (2) Apply TBD filter
  • MEG3 (1) Apply MEG3 filter
  • ACTA2 (1) Apply ACTA2 filter
  • GAPDH (1) Apply GAPDH filter
  • Topaz1 (1) Apply Topaz1 filter
  • Lgr5 (1) Apply Lgr5 filter
  • LOC646329 (1) Apply LOC646329 filter
  • S100B (1) Apply S100B filter
  • LINC-ROR (1) Apply LINC-ROR filter
  • TXNIP (1) Apply TXNIP filter
  • Il7r (1) Apply Il7r filter
  • KCNQ1OT1 (1) Apply KCNQ1OT1 filter
  • LINC00704 (1) Apply LINC00704 filter
  • CARTPT (1) Apply CARTPT filter
  • 4930463O16Rik (1) Apply 4930463O16Rik filter
  • Ecel1 (1) Apply Ecel1 filter
  • Miat (1) Apply Miat filter
  • Tnnt2 (1) Apply Tnnt2 filter
  • Thor (1) Apply Thor filter
  • EGFR-AS1 (1) Apply EGFR-AS1 filter
  • MIR503HG (1) Apply MIR503HG filter
  • EPCAT2F176 (1) Apply EPCAT2F176 filter
  • EPCAT4R966 (1) Apply EPCAT4R966 filter
  • (-) Remove HOXA11-AS filter HOXA11-AS (1)
  • BC062296 (1) Apply BC062296 filter
  • lnc13 (1) Apply lnc13 filter
  • vlincRNAs vlinc 377 (1) Apply vlincRNAs vlinc 377 filter
  • vlincRNAs vlinc 500 (1) Apply vlincRNAs vlinc 500 filter
  • LncND (1) Apply LncND filter
  • LINC00261 (1) Apply LINC00261 filter
  • tie-1as (1) Apply tie-1as filter
  • slincRAD (1) Apply slincRAD filter
  • LINC01213 (1) Apply LINC01213 filter
  • MAYA (1) Apply MAYA filter
  • ASCC3-tv1 (1) Apply ASCC3-tv1 filter

Product

  • RNAscope (2) Apply RNAscope filter
  • RNAscope 2.5 HD Red assay (1) Apply RNAscope 2.5 HD Red assay filter

Research area

  • (-) Remove lncRNA filter lncRNA (3)
  • Alzheimer's Disease (1) Apply Alzheimer's Disease filter
  • Cancer (1) Apply Cancer filter
  • Diabetic Kidney Disease (1) Apply Diabetic Kidney Disease filter
  • Inflammation (1) Apply Inflammation filter
  • Neuroscience (1) Apply Neuroscience filter

Category

  • Publications (3) Apply Publications filter
Expression of long non-coding RNA HOXA11-AS is correlated with progression of laryngeal squamous cell carcinoma

Am J Transl Res

2018 Feb 15

Qu L, Jin M, Yang L, Sun C, Wang P, Li Y, Tian L, Liu M, Sun Y.
PMID: - | DOI: -

Abstract: Long noncoding RNA HOXA11 antisense RNA (HOXA11-AS) is involved in tumorigenesis and development of some human cancers. However, the role of HOXA11-AS in human laryngeal squamous cell cancer (LSCC) is yet
unclear. In this study, we firstly investigated the expression of HOXA11-AS in LSCC. Microarray and qRT-PCR showed that the level of HOXA11-AS was significantly higher in LSCC than that in the corresponding adjacent non-neoplastic
tissues. ISH revealed that HOXA11-AS was strongly expressed in the nucleus and closely related to the T grade, neck nodal metastasis, and clinical stage. Patients with T3-4 grade, neck nodal metastasis, or advanced clinical
stage presented a high HOXA11-AS expression. Kaplan-Meier analysis showed that high HOXA11-AS expression could predict a poor prognosis in LSCC patients. Furthermore, HOXA11-AS knockdown significantly inhibited the
growth, migration, and invasion of LSCC cells. Taken together, the current data indicated that HOXA11-AS plays an oncogenic role in the cellular processes of LSCC and serve as a novel marker and a potential therapeutic target in
LSCC patients.

Small molecule targeting long noncoding RNA GAS5 administered intranasally improves neuronal insulin signaling and decreases neuroinflammation in an aged mouse model

Scientific reports

2023 Jan 06

Patel, RS;Lui, A;Hudson, C;Moss, L;Sparks, RP;Hill, SE;Shi, Y;Cai, J;Blair, LJ;Bickford, PC;Patel, NA;
PMID: 36609440 | DOI: 10.1038/s41598-022-27126-6

Shifts in normal aging set stage for neurodegeneration and dementia affecting 1 in 10 adults. The study demonstrates that lncRNA GAS5 is decreased in aged and Alzheimer's disease brain. The role and targets of lncRNA GAS5 in the aging brain were elucidated using a GAS5-targeting small molecule NPC86, a frontier in lncRNA-targeting therapeutic. Robust techniques such as molecular dynamics simulation of NPC86 binding to GAS5, in vitro functional assays demonstrating that GAS5 regulates insulin signaling, neuronal survival, phosphorylation of tau, and neuroinflammation via toll-like receptors support the role of GAS5 in maintaining healthy neurons. The study demonstrates the safety and efficacy of intranasal NPC86 treatment in aged mice to improve cellular functions with transcriptomic analysis in response to NPC86. In summary, the study demonstrates that GAS5 contributes to pathways associated with neurodegeneration and NPC86 has tremendous therapeutic potential to prevent the advent of neurodegenerative diseases and dementias.
The Impact of lncRNA on Diabetic Kidney Disease: Systematic Review and In Silico Analyses

Computational intelligence and neuroscience

2022 Apr 27

Zhao, Y;Yan, G;Mi, J;Wang, G;Yu, M;Jin, D;Tong, X;Wang, X;
PMID: 35528328 | DOI: 10.1155/2022/8400106

Long noncoding RNA (lncRNA) is involved in the occurrence and development of diabetic kidney disease (DKD). It is necessary to identify the expression of lncRNA from DKD patients through systematic reviews, and then carry out silico analyses to recognize the dysregulated lncRNA and their associated pathways.The study searched Pubmed, Embase, Cochrane Library, WanFang, VIP, CNKI, and CBM to find lncRNA studies on DKD published before March 1, 2021. Systematic review of the literature on this topic was conducted to determine the expression of lncRNA in DKD and non-DKD controls. For the dysregulated lncRNA in DKD patients, silico analysis was performed, and lncRNA2Target v2.0 and starBase were used to search for potential target genes of lncRNA. The Encyclopedia of Genomics (KEGG) pathway enrichment analysis was performed to better identify dysregulated lncRNAs in DKD and determine the associated signal pathways.According to the inclusion and exclusion criteria, 28 publications meeting the eligibility criteria were included in the systematic evaluation. A total of 3,394 patients were enrolled in this study, including 1,238 patients in DKD group, and 1,223 diabetic patients, and 933 healthy adults in control group. Compared with the control, there were eight lncRNA disorders in DKD patients (MALAT1, GAS5, MIAT, CASC2, NEAT1, NR_033515, ARAP1-AS2, and ARAP1-AS1). In addition, five lncRNAs (MALAT1, GAS5, MIAT, CASC2, and NEAT1) participated in disease-related signal pathways, indicating their role in DKD. Discussion. This study showed that there were eight lncRNAs in DKD that were persistently dysregulated, especially five lncRNAs which were closely related to the disease. Although systematic review included 28 studies that analyzed the expression of lncRNA in DKD-related tissues, the potential of these dysregulated lncRNAs as biomarkers or therapeutic targets for DKD remains to be further explored. Trial registration. PROSPERO (CRD42021248634).
X
Description
sense
Example: Hs-LAG3-sense
Standard probes for RNA detection are in antisense. Sense probe is reverse complent to the corresponding antisense probe.
Intron#
Example: Mm-Htt-intron2
Probe targets the indicated intron in the target gene, commonly used for pre-mRNA detection
Pool/Pan
Example: Hs-CD3-pool (Hs-CD3D, Hs-CD3E, Hs-CD3G)
A mixture of multiple probe sets targeting multiple genes or transcripts
No-XSp
Example: Hs-PDGFB-No-XMm
Does not cross detect with the species (Sp)
XSp
Example: Rn-Pde9a-XMm
designed to cross detect with the species (Sp)
O#
Example: Mm-Islr-O1
Alternative design targeting different regions of the same transcript or isoforms
CDS
Example: Hs-SLC31A-CDS
Probe targets the protein-coding sequence only
EnEmProbe targets exons n and m
En-EmProbe targets region from exon n to exon m
Retired Nomenclature
tvn
Example: Hs-LEPR-tv1
Designed to target transcript variant n
ORF
Example: Hs-ACVRL1-ORF
Probe targets open reading frame
UTR
Example: Hs-HTT-UTR-C3
Probe targets the untranslated region (non-protein-coding region) only
5UTR
Example: Hs-GNRHR-5UTR
Probe targets the 5' untranslated region only
3UTR
Example: Rn-Npy1r-3UTR
Probe targets the 3' untranslated region only
Pan
Example: Pool
A mixture of multiple probe sets targeting multiple genes or transcripts

Enabling research, drug development (CDx) and diagnostics

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