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Search

Probes for WFS1

ACD can configure probes for the various manual and automated assays for WFS1 for RNAscope Assay, or for Basescope Assay compatible for your species of interest.

  • Probes for WFS1 (210)
  • Kits & Accessories (0)
  • Support & Documents (0)
  • Publications (4)
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Refine Probe List

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Gene

  • WFS1 (4) Apply WFS1 filter
  • Rbfox3 (1) Apply Rbfox3 filter
  • DRD2 (1) Apply DRD2 filter
  • GATA4 (1) Apply GATA4 filter
  • PVALB (1) Apply PVALB filter
  • Sst (1) Apply Sst filter
  • PPP1R15A (1) Apply PPP1R15A filter
  • PROX1 (1) Apply PROX1 filter
  • Foxj1 (1) Apply Foxj1 filter
  • Id2 (1) Apply Id2 filter
  • Glis3 (1) Apply Glis3 filter
  • Lphn2 (1) Apply Lphn2 filter
  • Ttr (1) Apply Ttr filter
  • Psen1 (1) Apply Psen1 filter
  • P2ry12 (1) Apply P2ry12 filter
  • Tmem119 (1) Apply Tmem119 filter
  • COL6A2 (1) Apply COL6A2 filter
  • STAT5B (1) Apply STAT5B filter
  • Ly6g6e (1) Apply Ly6g6e filter
  • Oxr1 (1) Apply Oxr1 filter
  • Klhl2 (1) Apply Klhl2 filter
  • Arhgap32 (1) Apply Arhgap32 filter
  • Rein (1) Apply Rein filter
  • EI2AK3 (1) Apply EI2AK3 filter
  • ERN1/IRE1 (1) Apply ERN1/IRE1 filter

Product

  • RNAscope Multiplex Fluorescent Assay (2) Apply RNAscope Multiplex Fluorescent Assay filter
  • RNAscope Fluorescent Multiplex Assay (1) Apply RNAscope Fluorescent Multiplex Assay filter

Research area

  • Neuroscience (3) Apply Neuroscience filter
  • Inflammation (1) Apply Inflammation filter

Category

  • Publications (4) Apply Publications filter
Functional and molecular heterogeneity of D2R neurons along dorsal ventral axis in the striatum.

Nat Commun

2020 Apr 23

Puighermanal E, Castell L, Esteve-Codina A, Melser S Kaganovsky K, Zussy , Boubaker-Vitre J, Gut M, Rialle S, Kellendonk C, Sanz E, Quintana A, Marsicano G, Martin M, Rubinstein M, Girault JA, Ding JB Valjent E
PMID: 32327644 | DOI: 10.1038/s41467-020-15716-9

Action control is a key brain function determining the survival of animals in their environment. In mammals, neurons expressing dopamine D2 receptors (D2R) in the dorsal striatum (DS) and the nucleus accumbens (Acb) jointly but differentially contribute to the fine regulation of movement. However, their region-specific molecular features are presently unknown. By combining RNAseq of striatal D2R neurons and histological analyses, we identified hundreds of novel region-specific molecular markers, which may serve as tools to target selective subpopulations. As a proof of concept, we characterized the molecular identity of a subcircuit defined by WFS1 neurons and evaluated multiple behavioral tasks after its temporally-controlled deletion of D2R. Consequently, conditional D2R knockout mice displayed a significant reduction in digging behavior and an exacerbated hyperlocomotor response to amphetamine. Thus, targeted molecular analyses reveal an unforeseen heterogeneity in D2R-expressing striatal neuronal populations, underlying specific D2R's functional features in the control of specific motor behaviors.
Single cell molecular alterations reveal target cells and pathways of concussive brain injury.

Nat Commun.

2018 Sep 25

Arneson D, Zhang G, Ying Z, Zhuang Y, Byun HR, Ahn IS, Gomez-Pinilla F, Yang X.
PMID: 30254269 | DOI: 10.1038/s41467-018-06222-0

The complex neuropathology of traumatic brain injury (TBI) is difficult to dissect, given the convoluted cytoarchitecture of affected brain regions such as the hippocampus. Hippocampal dysfunction during TBI results in cognitive decline that may escalate to other neurological disorders, the molecular basis of which is hidden in the genomic programs of individual cells. Using the unbiased single cell sequencing method Drop-seq, we report that concussive TBI affects previously undefined cell populations, in addition to classical hippocampal cell types. TBI also impacts cell type-specific genes and pathways and alters gene co-expression across cell types, suggesting hidden pathogenic mechanisms and therapeutic target pathways. Modulating the thyroid hormone pathway as informed by the T4 transporter transthyretin Ttr mitigates TBI-associated genomic and behavioral abnormalities. Thus, single cell genomics provides unique information about how TBI impacts diverse hippocampal cell types, adding new insights into the pathogenic pathways amenable to therapeutics in TBI and related disorders.

Parahippocampal latrophilin-2 (ADGRL2) expression controls topographical presubiculum to entorhinal cortex circuit connectivity

Cell reports

2021 Nov 23

Donohue, JD;Amidon, RF;Murphy, TR;Wong, AJ;Liu, ED;Saab, L;King, AJ;Pae, H;Ajayi, MT;Anderson, GR;
PMID: 34818557 | DOI: 10.1016/j.celrep.2021.110031

Brain circuits are comprised of distinct interconnected neurons that are assembled by synaptic recognition molecules presented by defined pre- and post-synaptic neurons. This cell-cell recognition process is mediated by varying cellular adhesion molecules, including the latrophilin family of adhesion G-protein-coupled receptors. Focusing on parahippocampal circuitry, we find that latrophilin-2 (Lphn2; gene symbol ADGRL2) is specifically enriched in interconnected subregions of the medial entorhinal cortex (MEC), presubiculum (PrS), and parasubiculum (PaS). Retrograde viral tracing from the Lphn2-enriched region of the MEC reveals unique topographical patterning of inputs arising from the PrS and PaS that mirrors Lphn2 expression. Using a Lphn2 conditional knockout mouse model, we find that deletion of MEC Lphn2 expression selectively impairs retrograde viral labeling of inputs arising from the ipsilateral PrS. Combined with analysis of Lphn2 expression within the MEC, this study reveals Lphn2 to be selectively expressed by defined cell types and essential for MEC-PrS circuit connectivity.
Monogenic Diabetes and Integrated Stress Response Genes Display Altered Gene Expression in Type 1 Diabetes

Diabetes

2021 May 25

Hiller, H;Beachy, DE;Lebowitz, JJ;Engler, S;Mason, JR;Miller, DR;Kusmarteva, I;Jacobsen, LM;Posgai, AL;Khoshbouei, H;Oram, RA;Schatz, DA;Hattersley, AT;Bodenmiller, B;Atkinson, MA;Nick, HS;Wasserfall, CH;
PMID: 34035041 | DOI: 10.2337/db21-0070

Type 1 diabetes has a multifactorial autoimmune etiology, involving environmental prompts and polygenic predisposition. We hypothesized that pancreata from individuals with and at risk for type 1 diabetes would exhibit dysregulated expression of genes associated with monogenic forms of diabetes caused by non-redundant single-gene mutations. Employing a "monogenetic transcriptomic strategy," we measured the expression of these genes in human type 1 diabetes, autoantibody positive (autoantibody+), and control pancreas tissues using RTqPCR in accordance with the Minimum Information for Publication of Quantitative Real-Time PCR Experiments (MIQE) guidelines. Gene and protein expression were visualized in situ using immunofluorescence, RNAScope, and confocal microscopy. Two-dozen monogenic diabetes genes showed altered expression in human pancreata from individuals with type 1 diabetes versus unaffected controls. Six of these genes also saw dysregulation in pancreata from autoantibody+ persons at increased-risk for type 1 diabetes. As a subset of these genes are related to cellular stress responses, we measured integrated stress response (ISR) genes and identified 20 with altered expression in type 1 diabetes pancreata, including three of the four eIF2α-dependent kinases. Equally intriguing, we observed significant repression of the three arms of the ISR in autoantibody+ pancreata. Collectively, these efforts suggest monogenic diabetes and ISR genes are dysregulated early in the type 1 diabetes disease process and likely contribute to the disorder's pathogenesis.
X
Description
sense
Example: Hs-LAG3-sense
Standard probes for RNA detection are in antisense. Sense probe is reverse complent to the corresponding antisense probe.
Intron#
Example: Mm-Htt-intron2
Probe targets the indicated intron in the target gene, commonly used for pre-mRNA detection
Pool/Pan
Example: Hs-CD3-pool (Hs-CD3D, Hs-CD3E, Hs-CD3G)
A mixture of multiple probe sets targeting multiple genes or transcripts
No-XSp
Example: Hs-PDGFB-No-XMm
Does not cross detect with the species (Sp)
XSp
Example: Rn-Pde9a-XMm
designed to cross detect with the species (Sp)
O#
Example: Mm-Islr-O1
Alternative design targeting different regions of the same transcript or isoforms
CDS
Example: Hs-SLC31A-CDS
Probe targets the protein-coding sequence only
EnEmProbe targets exons n and m
En-EmProbe targets region from exon n to exon m
Retired Nomenclature
tvn
Example: Hs-LEPR-tv1
Designed to target transcript variant n
ORF
Example: Hs-ACVRL1-ORF
Probe targets open reading frame
UTR
Example: Hs-HTT-UTR-C3
Probe targets the untranslated region (non-protein-coding region) only
5UTR
Example: Hs-GNRHR-5UTR
Probe targets the 5' untranslated region only
3UTR
Example: Rn-Npy1r-3UTR
Probe targets the 3' untranslated region only
Pan
Example: Pool
A mixture of multiple probe sets targeting multiple genes or transcripts

Enabling research, drug development (CDx) and diagnostics

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