ACD can configure probes for the various manual and automated assays for TLR9 for RNAscope Assay, or for Basescope Assay compatible for your species of interest.
Autoimmunity. 2018 Dec 28:1-13.
2018 Dec 28
Masum MA, Ichii O, Hosny Ali Elewa Y, Nakamura T, Otani Y, Hosotani M, Kon Y.
PMID: 30592438 | DOI: 10.1080/08916934.2018.1549234
Lupus
2019 Feb 10
Masum MA, Ichii O, Elewa YHA, Kon Y.
PMID: - | DOI: 10.1177/0961203319828518
Abstract
Background
Toll-like receptor (Tlr) 9 is capable of recognizing exogenous and/or endogenous nucleic acids and plays a crucial role in innate and adaptive immunity. Recently, we showed that Tlr9 is overexpressed in podocytes, a component of the blood–urine barrier (BUB), in glomeruli of autoimmune glomerulonephritis (AGN) model mice. This study investigated the activation of peritubular capillary (PTC) endothelial cells (ECs), a component of the BUB in the tubulointerstitium, through overexpressing Tlr9, and the subsequent development of tubulointerstitial lesions (TILs) in AGN model mice.
Methods
Lupus-prone BXSB/MpJ-Yaa (Yaa) and BXSB/MpJ (BXSB) mice were used as an AGN model and control, respectively. In addition to histopathological and ultrastructural techniques, protein and mRNA levels were also evaluated. The relationship between Tlr9 and TIL indices was analyzed by statistical correlation analysis.
Results
Yaa mice developed TILs and showed strong Tlr9 mRNA expression in PTC ECs at 24 weeks (wks) of age. However, BXSB mice showed no TIL but faint expression of Tlr9 mRNA at 8 and 24 wks of age. Tlr9 protein localization on PTC was almost absent in BXSB mice at both ages but intense expression was found in Yaa mice only at 24 wks of age. Relative mRNA expression of Tlr9 and its putative downstream cytokines, including interleukin 1 beta (Il1b), Il6, interferon gamma (Ifng), and tumor necrosis factor alpha (Tnf) was markedly increased in isolated tubulointerstitium from Yaa mice at 24 wks of age. Furthermore, electron microscopy examination revealed PTC injury and TIL in Yaa mice at 24 wks. The expression level of Tlr9 in the tubulointerstitium was correlated with inflammatory cells in TILs, injured PTC, Ilb and Tnf expression, and damaged tubules (P < 0.05 and 0.01).
Conclusion
Induced expression of Tlr9 in ECs correlates with PTC injury and the development of TILs in lupus-prone AGN model mice.
JACC: Basic to Translational Science
2021 Dec 01
Ma, X;Rawnsley, D;Kovacs, A;Islam, M;Murphy, J;Zhao, C;Kumari, M;Foroughi, L;Liu, H;Qi, K;Diwan, A;Hyrc, K;Evans, S;Satoh, T;French, B;Margulies, K;Javaheri, A;Razani, B;Mann, D;Mani, K;Diwan, A;
| DOI: 10.1016/j.jacbts.2021.12.002
Developmental dynamics : an official publication of the American Association of Anatomists
2021 Feb 11
Seese, SE;Deml, B;Muheisen, S;Sorokina, E;Semina, EV;
PMID: 33570754 | DOI: 10.1002/dvdy.312
Molecular cancer
2022 Dec 12
Rizzello, C;Cancila, V;Sangaletti, S;Botti, L;Ratti, C;Milani, M;Dugo, M;Bertoni, F;Tripodo, C;Chiodoni, C;Colombo, MP;
PMID: 36503430 | DOI: 10.1186/s12943-022-01687-6
Description | ||
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sense Example: Hs-LAG3-sense | Standard probes for RNA detection are in antisense. Sense probe is reverse complent to the corresponding antisense probe. | |
Intron# Example: Mm-Htt-intron2 | Probe targets the indicated intron in the target gene, commonly used for pre-mRNA detection | |
Pool/Pan Example: Hs-CD3-pool (Hs-CD3D, Hs-CD3E, Hs-CD3G) | A mixture of multiple probe sets targeting multiple genes or transcripts | |
No-XSp Example: Hs-PDGFB-No-XMm | Does not cross detect with the species (Sp) | |
XSp Example: Rn-Pde9a-XMm | designed to cross detect with the species (Sp) | |
O# Example: Mm-Islr-O1 | Alternative design targeting different regions of the same transcript or isoforms | |
CDS Example: Hs-SLC31A-CDS | Probe targets the protein-coding sequence only | |
EnEm | Probe targets exons n and m | |
En-Em | Probe targets region from exon n to exon m | |
Retired Nomenclature | ||
tvn Example: Hs-LEPR-tv1 | Designed to target transcript variant n | |
ORF Example: Hs-ACVRL1-ORF | Probe targets open reading frame | |
UTR Example: Hs-HTT-UTR-C3 | Probe targets the untranslated region (non-protein-coding region) only | |
5UTR Example: Hs-GNRHR-5UTR | Probe targets the 5' untranslated region only | |
3UTR Example: Rn-Npy1r-3UTR | Probe targets the 3' untranslated region only | |
Pan Example: Pool | A mixture of multiple probe sets targeting multiple genes or transcripts |
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