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Search

Probes for TGF-β

ACD can configure probes for the various manual and automated assays for TGF-β for RNAscope Assay, or for Basescope Assay compatible for your species of interest.

  • Probes for TGF-β (0)
  • Kits & Accessories (0)
  • Support & Documents (0)
  • Publications (2)
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Refine Probe List

Content for comparison

Gene

  • TGF-β (8) Apply TGF-β filter
  • TBD (8) Apply TBD filter
  • TNF-α (5) Apply TNF-α filter
  • TGFB1 (4) Apply TGFB1 filter
  • IL-10 (4) Apply IL-10 filter
  • IFN-γ (4) Apply IFN-γ filter
  • IL-17A (4) Apply IL-17A filter
  • Tgf-β1 (4) Apply Tgf-β1 filter
  • Tgfbr1 (3) Apply Tgfbr1 filter
  • Wnt5a (2) Apply Wnt5a filter
  • Tgfb3 (2) Apply Tgfb3 filter
  • Tgfbr2 (2) Apply Tgfbr2 filter
  • Tgfβ2 (2) Apply Tgfβ2 filter
  • ACTA2 (1) Apply ACTA2 filter
  • Agtr1a (1) Apply Agtr1a filter
  • Wnt4 (1) Apply Wnt4 filter
  • Wnt7a (1) Apply Wnt7a filter
  • CXCL10 (1) Apply CXCL10 filter
  • Ptch1 (1) Apply Ptch1 filter
  • Nrg1 (1) Apply Nrg1 filter
  • TLR2 (1) Apply TLR2 filter
  • Gfral (1) Apply Gfral filter
  • EREG (1) Apply EREG filter
  • GREM1 (1) Apply GREM1 filter
  • IGF1 (1) Apply IGF1 filter
  • Foxp3 (1) Apply Foxp3 filter
  • ITGB6 (1) Apply ITGB6 filter
  • ROBO1 (1) Apply ROBO1 filter
  • MKI67 (1) Apply MKI67 filter
  • NOTUM (1) Apply NOTUM filter
  • SHH (1) Apply SHH filter
  • MYH11 (1) Apply MYH11 filter
  • WC1 (1) Apply WC1 filter
  • Wif1 (1) Apply Wif1 filter
  • COL11A1 (1) Apply COL11A1 filter
  • Ret (1) Apply Ret filter
  • Nuak1 (1) Apply Nuak1 filter
  • Dusp1 (1) Apply Dusp1 filter
  • CXCL9 (1) Apply CXCL9 filter
  • slit2 (1) Apply slit2 filter
  • robo2 (1) Apply robo2 filter
  • IL-16 (1) Apply IL-16 filter
  • TNF (1) Apply TNF filter
  • (-) Remove PD-L1 filter PD-L1 (1)
  • VIM (1) Apply VIM filter
  • DapB (1) Apply DapB filter
  • (-) Remove Pofut2 filter Pofut2 (1)
  • IL-12 (1) Apply IL-12 filter
  • mycobacterial 23s (1) Apply mycobacterial 23s filter
  • Optn (1) Apply Optn filter

Product

  • RNAscope (1) Apply RNAscope filter
  • RNAscope 2.5 HD Brown Assay (1) Apply RNAscope 2.5 HD Brown Assay filter

Research area

  • Canine Cancer (1) Apply Canine Cancer filter
  • Development (1) Apply Development filter
  • Veterinary (1) Apply Veterinary filter

Category

  • (-) Remove Publications filter Publications (2)
Characterization of expression and prognostic implications of transforming growth factor beta, programmed death-ligand 1, and T regulatory cells in canine histiocytic sarcoma

Veterinary immunology and immunopathology

2023 Mar 01

Murphy, JD;Shiomitsu, K;Milner, RJ;Lejeune, A;Ossiboff, RJ;Gell, JC;Axiak-Bechtel, S;
PMID: 36804838 | DOI: 10.1016/j.vetimm.2023.110560

Histiocytic sarcoma (HS) is an aggressive malignant neoplasm in dogs. Expression and prognostic significance of transforming growth factor beta (TGF-β), programmed death-ligand 1 (PD-L1), and T regulatory cells (Tregs) in HS is unknown. The goal of this study was to investigate the expression and prognostic significance of TGF-β, PD-L1, and FoxP3/CD25 in canine HS utilizing RNA in situ hybridization (RNAscope ). After validation was performed, RNAscope on formalin-fixed paraffin-embedded (FFPE) patient HS tissue samples was performed for all targets and expression quantified with HALO software image analysis. Cox proportional hazard model was conducted to investigate the association between survival time and each variable. Additionally, for categorical data, the Kaplan-Meier product-limit method was used to generate survival curves. TGF-β and PD-L1 mRNA expression was confirmed in the DH82 cell line by reverse transcription polymerase chain reaction (RT-PCR) and CD25 + FoxP3 + cells were detected by flow cytometry in peripheral blood. Once the RNAscope method was validated, TGF-β H-score and dots/cell and FoxP3 dots/cell were assessed in HS samples and found to be significantly correlated with survival. Moderate positive correlations were found between FoxP3 and PD-L1 H-score, percent staining area, and dots/cell, and FoxP3 and TGF-β dots/cell. In summary, RNAscope is a valid technique to detect TGF-β and PD-L1 expression and identify Tregs in canine HS FFPE tissues. Furthermore, canine HS expresses TGF-β and PD-L1. Increased TGF-β and FoxP3 correlated with worse prognosis. Prospective studies are warranted to further investigate TGF-β, PD-L1, and Tregs effect on prognosis.
O-fucosylation of thrombospondin type 1 repeats is essential for ECM remodeling and signaling during bone development

Matrix biology : journal of the International Society for Matrix Biology

2022 Feb 12

Neupane, S;Berardinelli, SJ;Cameron, DC;Grady, RC;Komatsu, DE;Percival, CJ;Takeuchi, M;Ito, A;Liu, TW;Nairn, AV;Moremen, KW;Haltiwanger, RS;Holdener, BC;
PMID: 35167946 | DOI: 10.1016/j.matbio.2022.02.002

Many extracellular matrix (ECM) associated proteins that influence ECM properties have Thrombospondin type 1 repeats (TSRs) which are modified with O-linked fucose. The O-fucose is added in the endoplasmic reticulum to folded TSRs by the enzyme Protein O-fucosyltransferase-2 (POFUT2) and is proposed to promote efficient trafficking of substrates. The importance of this modification for function of TSR-proteins is underscored by the early embryonic lethality of mouse embryos lacking Pofut2. To overcome early lethality and investigate the impact of the Pofut2 knockout on the secretion of POFUT2 substrates and on extracellular matrix properties in vivo, we deleted Pofut2 in the developing limb mesenchyme using Prrx1-Cre recombinase. Loss of Pofut2 in the limb mesenchyme caused significant shortening of the limbs, long bones and tendons and stiff joint resembling the musculoskeletal dysplasias in human and in mice with mutations in ADAMTS or ADAMTSL proteins. Limb shortening was evident at embryonic day 14.5 where loss of O-fucosylation led to an accumulation of fibrillin 2 (FBN2), decreased BMP and IHH signaling, and increased TGF-β signaling. Consistent with these changes we saw a decrease in the size of the hypertrophic zone with lower levels of Collagen-X. Unexpectedly, we observed minimal effects of the Pofut2 knockout on secretion of two POFUT2 substrates, CCN2 or ADAMTS17, in the developing bone. In contrast, CCN2 and two other POFUT2 substrates important for bone development, ADAMTS6 and 10, showed a decrease in secretion from POFUT2-null HEK293T cells in vitro. These combined results suggest that the impact of the Pofut2 mutation is cell-type specific. In addition, these observations raise the possibility that the O-fucose modification on TSRs extends beyond promoting efficient trafficking of POFUT2 substrates and has the potential to influence their function in the extracellular environment.
X
Description
sense
Example: Hs-LAG3-sense
Standard probes for RNA detection are in antisense. Sense probe is reverse complent to the corresponding antisense probe.
Intron#
Example: Mm-Htt-intron2
Probe targets the indicated intron in the target gene, commonly used for pre-mRNA detection
Pool/Pan
Example: Hs-CD3-pool (Hs-CD3D, Hs-CD3E, Hs-CD3G)
A mixture of multiple probe sets targeting multiple genes or transcripts
No-XSp
Example: Hs-PDGFB-No-XMm
Does not cross detect with the species (Sp)
XSp
Example: Rn-Pde9a-XMm
designed to cross detect with the species (Sp)
O#
Example: Mm-Islr-O1
Alternative design targeting different regions of the same transcript or isoforms
CDS
Example: Hs-SLC31A-CDS
Probe targets the protein-coding sequence only
EnEmProbe targets exons n and m
En-EmProbe targets region from exon n to exon m
Retired Nomenclature
tvn
Example: Hs-LEPR-tv1
Designed to target transcript variant n
ORF
Example: Hs-ACVRL1-ORF
Probe targets open reading frame
UTR
Example: Hs-HTT-UTR-C3
Probe targets the untranslated region (non-protein-coding region) only
5UTR
Example: Hs-GNRHR-5UTR
Probe targets the 5' untranslated region only
3UTR
Example: Rn-Npy1r-3UTR
Probe targets the 3' untranslated region only
Pan
Example: Pool
A mixture of multiple probe sets targeting multiple genes or transcripts

Enabling research, drug development (CDx) and diagnostics

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