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Probes for PTEN

ACD can configure probes for the various manual and automated assays for PTEN for RNAscope Assay, or for Basescope Assay compatible for your species of interest.

  • Probes for PTEN (475)
  • Kits & Accessories (0)
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Identification of Pik3ca mutation as a genetic driver of prostate cancer that cooperates with Pten loss to accelerate progression and castration-resistant growth

Cancer Res

2018 Mar 26

Pearson HB, Li J, Meniel VS, Fennell CM, Waring P, Montgomery KG, Rebello RJ, Macpherson AA, Koushyar S, Furic L, Cullinane C, Clarkson RW, Smalley MJ, Simpson KJ, Phesse TJ, Shepherd PR, Humbert PO, Sansom OJ, Phillips WA.
PMID: 29581176 | DOI: 10.1158/2159-8290.CD-17-0867

Genetic alterations that potentiate PI3K signalling are frequent in prostate cancer, yet how different genetic drivers of the PI3K cascade contribute to prostate cancer is unclear. Here, we report PIK3CA mutation/amplification correlates with poor prostate cancer patient survival. To interrogate the requirement of different PI3K genetic drivers in prostate cancer, we employed a genetic approach to mutate Pik3ca in mouse prostate epithelium. We show Pik3caH1047R mutation causes p110α-dependent invasive prostate carcinoma in-vivo. Furthermore, we report PIK3CA mutation and PTEN loss co-exist in prostate cancer patients, and can cooperate in-vivo to accelerate disease progressionvia AKT-mTORC1/2 hyperactivation. Contrasting single mutants that slowly acquire castration-resistant prostate cancer (CRPC), concomitant Pik3ca mutation and Pten loss caused de-novo CRPC. Thus, Pik3ca mutation and Pten deletion are not functionally redundant. Our findings indicate that PIK3CA mutation is an attractive prognostic indicator for prostate cancer that may cooperate with PTEN loss to facilitate CRPC in patients.

AKT-dependent and-independent pathways mediate PTEN deletion-induced CNS axon regeneration.

Cell Death Dis.

2019 Feb 27

Huang H, Miao L, Yang L, Liang F, Wang Q, Zhuang P, Sun Y, Hu Y.
PMID: 30814515 | DOI: 10.1038/s41419-018-1289-z

Phosphatase and tensin homolog (PTEN) acts as a brake for the phosphatidylinositol 3-kinase-AKT-mTOR complex 1 (mTORC1) pathway, the deletion of which promotes potent central nervous system (CNS) axon regeneration. Previously, we demonstrated that AKT activation is sufficient to promote CNS axon regeneration to a lesser extent than PTEN deletion. It is still questionable whether AKT is entirely responsible for the regenerative effect of PTEN deletion on CNS axons. Here, we show that blocking AKT or its downstream effectors, mTORC1 and GSK3β, significantly reduces PTEN deletion-induced mouse optic nerve regeneration, indicating the necessary role of AKT-dependent signaling. However, AKT is only marginally activated in PTEN-null mice due to mTORC1-mediated feedback inhibition. That combining PTEN deletion with AKT overexpression or GSK3β deletion achieves significantly more potent axonal regeneration suggests an AKT-independent pathway for axon regeneration. Elucidating the AKT-independent pathway is required to develop effective strategies for CNS axon regeneration.

Dysregulation of PI3K/Akt/PTEN Pathway in Canine Mammary Tumor

Animals

2021 Jul 12

Kim, S;Seung, B;Cho, S;Lim, H;Bae, M;Sur, J;
| DOI: 10.3390/ani11072079

The PI3K/Akt/PTEN axis is one of the most important signaling pathways in tumorigenesis. Recently, mutation of PIK3CA has been highlighted due to the similarities of mutational hotspots in both dogs and humans. PIK3CA H1047R (c.3140A > G) has been discovered as the most common mutational hot spot in canine mammary tumor in recent studies, while the feature of PIK3CA-mutated canine mammary tumor is obscure. Methods: A total of 83 mammary samples classified as normal (n = 13), adenoma (n = 25), low-grade carcinoma (n = 21), and high-grade carcinoma (n = 24) were included in this study. Genomic DNA from each sample was extracted, amplified by conventional PCR, and analyzed through Sanger sequencing. Analysis for the expression of PIK3CA, Akt, p-Akt, and PTEN was performed by immunohistochemistry, and of Akt2 by RNA in situ hybridization. Results: PIK3CA H1047R mutation was detected in 14.3% (10/70) of tumor samples. Dysregulation of p-Akt, Akt2, and PTEN was observed in mammary tumor samples, but only PTEN dysregulation was associated with PIK3CA H1047R mutation. Conclusions: The present study showed that dysregulation of components in the PI3K/Akt/PTEN pathway is a feature of canine mammary tumors, but this dysregulation is not directly correlated to the PIK3CA H1047R mutation except for PTEN expression.
PTEN loss and p27 loss differ among morphologic patterns of prostate cancer, including cribriform

Human Pathology

2017 May 10

Ronen S, Abbott DW, Kravtsov O, Abdelkader A, Xub Y, Banerjee A, Iczkowski KA.
PMID: - | DOI: 10.1016/j.humpath.2017.04.024

The presence and extent of cribriform pattern of prostate cancer portend recurrence and cancer death. Therelative expressions within this morphology of the prognostically adverse loss of PTEN, and the downstream inactivation of cell cycle inhibitor p27/Kip1 had been uncertain. In this study, we examined 52 cases of cribriform cancer by immunohistochemistry (IHC) for PTEN, p27, and CD44 variant (v)7/8, and a subset of 17 casesby chromogenic in situ hybridization (ISH) using probe for PTEN or CDKN1B (gene for p27). The fractions of epithelial pixels positive by IHC and ISH were digitally assessed for benign acini, high grade prostatic intraepithelial neoplasia (PIN), and 8 morphological patterns of cancer. Immunostaining results demonstrated that: 1. PTEN loss was significant for fused small acini, cribriform-central cells, small cribriform acini, and Gleason grade 5 cells in comparison with other acini. 2. p27 loss was significant only for cribriform-peripheral cells; and borderline-significant for fused small acini in comparison with benign acini. 3. CD44v7/8 showed expression loss in cribriform-peripheral cells; other comparisons were not significant. ISH showed thatcribriform cancer had significant PTEN loss normalized to benign acini (P < .02), while Gleason 3 cancer or fused small acini did not. With CDKN1B, the degree of signal loss among various cancer morphologies was insignificant. In conclusion, molecular disparities emerged between the fused small acini and cribriform patterns of Gleason 4 cancer. PTEN or p27 loss as prognostic factors demand distinct assessment in the varieties of Gleason 4 cancer, and in the biphenotypic peripheral versus central populations in cribriform structures.

ITEM
RNAscope™ Probe- Hs-PINK1 ?
Cat No. 559111
Manual Assay RNAscope

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    Specifications

    Gene :PINK1
    Species* :Human
    Species (common):Human
    Entrez Gene ID :65018
    Gene Alias :BRPK
    Accession No:NM_032409.2
    Target Region [Base Pairs (bp)] :1517 - 2641
    No. of Pairs :20
    Assay Compatibility :RNAscope™ 2.5 HD Assay- BROWN,RNAscope™ 2.5 HD Assay- RED,RNAscope™ 2.5 HD Duplex Assay,RNAscope™ Multiplex Fluorescent Assay
    Shipping Temp :2-8 C
    Storage Temp :2-8 C
    Shelf Life :24 months from the date of manufacturing
    * Please check expiration dates on the reagent package
    Probe description :N/A
    Channel :1
    RNAscope™ Assay Platform :Manual Assay RNAscope
  • Assay Compatibility
    RNAscope™ 2.5 HD Assay- BROWN,RNAscope™ 2.5 HD Assay- RED,RNAscope™ 2.5 HD Duplex Assay,RNAscope™ Multiplex Fluorescent Assay
  • Recommended Controls
  • Product Insert/Data Sheet
    No Related Documents...

Specifications

Gene :PINK1
Species* :Human
Species (common):Human
Entrez Gene ID :65018
Gene Alias :BRPK
Accession No:NM_032409.2
Target Region [Base Pairs (bp)] :1517 - 2641
No. of Pairs :20
Assay Compatibility :RNAscope™ 2.5 HD Assay- BROWN,RNAscope™ 2.5 HD Assay- RED,RNAscope™ 2.5 HD Duplex Assay,RNAscope™ Multiplex Fluorescent Assay
Shipping Temp :2-8 C
Storage Temp :2-8 C
Shelf Life :24 months from the date of manufacturing
* Please check expiration dates on the reagent package
Probe description :N/A
Channel :1
RNAscope™ Assay Platform :Manual Assay RNAscope
RNAscope™ 2.5 HD Assay- BROWN,RNAscope™ 2.5 HD Assay- RED,RNAscope™ 2.5 HD Duplex Assay,RNAscope™ Multiplex Fluorescent Assay
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ITEM
RNAscope™ Probe- Mm-Pten-E5 ?
Cat No. 464331
Manual Assay RNAscope

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    Specifications

    Gene :PTEN
    Species* :Mouse
    Species (common):House Mouse
    Entrez Gene ID :19211
    Gene Alias :2310035O07Rik
    Accession No:NM_008960.2
    Target Region [Base Pairs (bp)] :1120 - 1348
    No. of Pairs :5
    Assay Compatibility :RNAscope™ 2.5 HD Assay- BROWN,RNAscope™ 2.5 HD Assay- RED,RNAscope™ 2.5 HD Duplex Assay,RNAscope™ Multiplex Fluorescent Assay
    Shipping Temp :2-8 C
    Storage Temp :2-8 C
    Shelf Life :24 months from the date of manufacturing
    * Please check expiration dates on the reagent package
    Probe description :N/A
    Channel :1
    RNAscope™ Assay Platform :Manual Assay RNAscope
  • Assay Compatibility
    RNAscope™ 2.5 HD Assay- BROWN,RNAscope™ 2.5 HD Assay- RED,RNAscope™ 2.5 HD Duplex Assay,RNAscope™ Multiplex Fluorescent Assay
  • Recommended Controls
  • Product Insert/Data Sheet
    No Related Documents...

Specifications

Gene :PTEN
Species* :Mouse
Species (common):House Mouse
Entrez Gene ID :19211
Gene Alias :2310035O07Rik
Accession No:NM_008960.2
Target Region [Base Pairs (bp)] :1120 - 1348
No. of Pairs :5
Assay Compatibility :RNAscope™ 2.5 HD Assay- BROWN,RNAscope™ 2.5 HD Assay- RED,RNAscope™ 2.5 HD Duplex Assay,RNAscope™ Multiplex Fluorescent Assay
Shipping Temp :2-8 C
Storage Temp :2-8 C
Shelf Life :24 months from the date of manufacturing
* Please check expiration dates on the reagent package
Probe description :N/A
Channel :1
RNAscope™ Assay Platform :Manual Assay RNAscope
RNAscope™ 2.5 HD Assay- BROWN,RNAscope™ 2.5 HD Assay- RED,RNAscope™ 2.5 HD Duplex Assay,RNAscope™ Multiplex Fluorescent Assay
No Related Documents...
ITEM
RNAscope™ Probe- Mm-Pten ?
Cat No. 316301
Manual Assay RNAscope

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    Specifications

    Gene :PTEN
    Species* :Mouse
    Species (common):House Mouse
    Entrez Gene ID :19211
    Gene Alias :2310035O07Rik
    Accession No:NM_008960.2
    Target Region [Base Pairs (bp)] :903 - 1906
    No. of Pairs :20
    Assay Compatibility :RNAscope™ 2.5 HD Assay- BROWN,RNAscope™ 2.5 HD Assay- RED,RNAscope™ 2.5 HD Duplex Assay,RNAscope™ Multiplex Fluorescent Assay
    Shipping Temp :2-8 C
    Storage Temp :2-8 C
    Shelf Life :24 months from the date of manufacturing
    * Please check expiration dates on the reagent package
    Probe description :N/A
    Channel :1
    RNAscope™ Assay Platform :Manual Assay RNAscope
  • Assay Compatibility
    RNAscope™ 2.5 HD Assay- BROWN,RNAscope™ 2.5 HD Assay- RED,RNAscope™ 2.5 HD Duplex Assay,RNAscope™ Multiplex Fluorescent Assay
  • Recommended Controls
  • Product Insert/Data Sheet
    No Related Documents...

Specifications

Gene :PTEN
Species* :Mouse
Species (common):House Mouse
Entrez Gene ID :19211
Gene Alias :2310035O07Rik
Accession No:NM_008960.2
Target Region [Base Pairs (bp)] :903 - 1906
No. of Pairs :20
Assay Compatibility :RNAscope™ 2.5 HD Assay- BROWN,RNAscope™ 2.5 HD Assay- RED,RNAscope™ 2.5 HD Duplex Assay,RNAscope™ Multiplex Fluorescent Assay
Shipping Temp :2-8 C
Storage Temp :2-8 C
Shelf Life :24 months from the date of manufacturing
* Please check expiration dates on the reagent package
Probe description :N/A
Channel :1
RNAscope™ Assay Platform :Manual Assay RNAscope
RNAscope™ 2.5 HD Assay- BROWN,RNAscope™ 2.5 HD Assay- RED,RNAscope™ 2.5 HD Duplex Assay,RNAscope™ Multiplex Fluorescent Assay
No Related Documents...
ITEM
RNAscope™ Probe- Mm-Pink1 ?
Cat No. 524081
Manual Assay RNAscope

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    Specifications

    Gene :PINK1
    Species* :Mouse
    Species (common):House Mouse
    Entrez Gene ID :68943
    Gene Alias :1190006F07Rik
    Accession No:NM_026880.2
    Target Region [Base Pairs (bp)] :1317 - 2359
    No. of Pairs :20
    Assay Compatibility :RNAscope™ 2.5 HD Assay- BROWN,RNAscope™ 2.5 HD Assay- RED,RNAscope™ 2.5 HD Duplex Assay,RNAscope™ Multiplex Fluorescent Assay
    Shipping Temp :2-8 C
    Storage Temp :2-8 C
    Shelf Life :24 months from the date of manufacturing
    * Please check expiration dates on the reagent package
    Probe description :N/A
    Channel :1
    RNAscope™ Assay Platform :Manual Assay RNAscope
  • Assay Compatibility
    RNAscope™ 2.5 HD Assay- BROWN,RNAscope™ 2.5 HD Assay- RED,RNAscope™ 2.5 HD Duplex Assay,RNAscope™ Multiplex Fluorescent Assay
  • Recommended Controls
  • Product Insert/Data Sheet
    No Related Documents...

Specifications

Gene :PINK1
Species* :Mouse
Species (common):House Mouse
Entrez Gene ID :68943
Gene Alias :1190006F07Rik
Accession No:NM_026880.2
Target Region [Base Pairs (bp)] :1317 - 2359
No. of Pairs :20
Assay Compatibility :RNAscope™ 2.5 HD Assay- BROWN,RNAscope™ 2.5 HD Assay- RED,RNAscope™ 2.5 HD Duplex Assay,RNAscope™ Multiplex Fluorescent Assay
Shipping Temp :2-8 C
Storage Temp :2-8 C
Shelf Life :24 months from the date of manufacturing
* Please check expiration dates on the reagent package
Probe description :N/A
Channel :1
RNAscope™ Assay Platform :Manual Assay RNAscope
RNAscope™ 2.5 HD Assay- BROWN,RNAscope™ 2.5 HD Assay- RED,RNAscope™ 2.5 HD Duplex Assay,RNAscope™ Multiplex Fluorescent Assay
No Related Documents...
ITEM
RNAscope™ Probe- Hs-PTEN-3UTR ?
Cat No. 408511
Manual Assay RNAscope

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    Specifications

    Gene :PTEN
    Species* :Human
    Species (common):Human
    Entrez Gene ID :5728
    Gene Alias :10q23del,BZS,CWS1,DEC,GLM2,MHAM,MMAC11,TEP1,PTEN
    Accession No:NM_000314.4
    Target Region [Base Pairs (bp)] :3408 - 5356
    No. of Pairs :19
    Assay Compatibility :RNAscope™ 2.5 HD Assay- BROWN,RNAscope™ 2.5 HD Assay- RED,RNAscope™ 2.5 HD Duplex Assay,RNAscope™ Multiplex Fluorescent Assay
    Shipping Temp :2-8 C
    Storage Temp :2-8 C
    Shelf Life :24 months from the date of manufacturing
    * Please check expiration dates on the reagent package
    Probe description :Homo sapiens phosphatase and tensin homolog (PTEN), mRNA
    Channel :1
    RNAscope™ Assay Platform :Manual Assay RNAscope
  • Assay Compatibility
    RNAscope™ 2.5 HD Assay- BROWN,RNAscope™ 2.5 HD Assay- RED,RNAscope™ 2.5 HD Duplex Assay,RNAscope™ Multiplex Fluorescent Assay
  • Recommended Controls
  • Product Insert/Data Sheet
    No Related Documents...

Specifications

Gene :PTEN
Species* :Human
Species (common):Human
Entrez Gene ID :5728
Gene Alias :10q23del,BZS,CWS1,DEC,GLM2,MHAM,MMAC11,TEP1,PTEN
Accession No:NM_000314.4
Target Region [Base Pairs (bp)] :3408 - 5356
No. of Pairs :19
Assay Compatibility :RNAscope™ 2.5 HD Assay- BROWN,RNAscope™ 2.5 HD Assay- RED,RNAscope™ 2.5 HD Duplex Assay,RNAscope™ Multiplex Fluorescent Assay
Shipping Temp :2-8 C
Storage Temp :2-8 C
Shelf Life :24 months from the date of manufacturing
* Please check expiration dates on the reagent package
Probe description :Homo sapiens phosphatase and tensin homolog (PTEN), mRNA
Channel :1
RNAscope™ Assay Platform :Manual Assay RNAscope
RNAscope™ 2.5 HD Assay- BROWN,RNAscope™ 2.5 HD Assay- RED,RNAscope™ 2.5 HD Duplex Assay,RNAscope™ Multiplex Fluorescent Assay
No Related Documents...
ITEM
RNAscope™ Probe- Rn-Pten ?
Cat No. 410911
Manual Assay RNAscope

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    Specifications

    Gene :PTEN
    Species* :Rat
    Species (common):Norway Rat
    Entrez Gene ID :50557
    Gene Alias :MMAC1,Mmac,TEP1
    Accession No:NM_031606.1
    Target Region [Base Pairs (bp)] :2 - 1212
    No. of Pairs :20
    Assay Compatibility :RNAscope™ 2.5 HD Assay- BROWN,RNAscope™ 2.5 HD Assay- RED,RNAscope™ 2.5 HD Duplex Assay,RNAscope™ Multiplex Fluorescent Assay
    Shipping Temp :2-8 C
    Storage Temp :2-8 C
    Shelf Life :24 months from the date of manufacturing
    * Please check expiration dates on the reagent package
    Probe description :Rattus norvegicus phosphatase and tensin homolog (Pten) mRNA
    Channel :1
    RNAscope™ Assay Platform :Manual Assay RNAscope
  • Assay Compatibility
    RNAscope™ 2.5 HD Assay- BROWN,RNAscope™ 2.5 HD Assay- RED,RNAscope™ 2.5 HD Duplex Assay,RNAscope™ Multiplex Fluorescent Assay
  • Recommended Controls
  • Product Insert/Data Sheet
    No Related Documents...

Specifications

Gene :PTEN
Species* :Rat
Species (common):Norway Rat
Entrez Gene ID :50557
Gene Alias :MMAC1,Mmac,TEP1
Accession No:NM_031606.1
Target Region [Base Pairs (bp)] :2 - 1212
No. of Pairs :20
Assay Compatibility :RNAscope™ 2.5 HD Assay- BROWN,RNAscope™ 2.5 HD Assay- RED,RNAscope™ 2.5 HD Duplex Assay,RNAscope™ Multiplex Fluorescent Assay
Shipping Temp :2-8 C
Storage Temp :2-8 C
Shelf Life :24 months from the date of manufacturing
* Please check expiration dates on the reagent package
Probe description :Rattus norvegicus phosphatase and tensin homolog (Pten) mRNA
Channel :1
RNAscope™ Assay Platform :Manual Assay RNAscope
RNAscope™ 2.5 HD Assay- BROWN,RNAscope™ 2.5 HD Assay- RED,RNAscope™ 2.5 HD Duplex Assay,RNAscope™ Multiplex Fluorescent Assay
No Related Documents...
ITEM
RNAscope™ Probe- Mm-Pten-C2 ?
Cat No. 316301-C2
Manual Assay RNAscope

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  • View Details

    Specifications

    Gene :PTEN
    Species* :Mouse
    Species (common):House Mouse
    Entrez Gene ID :19211
    Gene Alias :2310035O07Rik,A130070J02Rik,AI463227,B430203M17Rik,MMAC1,TEP1
    Accession No:NM_008960.2
    Target Region [Base Pairs (bp)] :903 - 1906
    No. of Pairs :20
    Assay Compatibility :RNAscope™ 2.5 HD Duplex Assay,RNAscope™ Multiplex Fluorescent Assay
    Shipping Temp :2-8 C
    Storage Temp :2-8 C
    Shelf Life :24 months from the date of manufacturing
    * Please check expiration dates on the reagent package
    Probe description :Mus musculus phosphatase and tensin homolog (Pten) mRNA
    Channel :2
    RNAscope™ Assay Platform :Manual Assay RNAscope
  • Assay Compatibility
    RNAscope™ 2.5 HD Duplex Assay,RNAscope™ Multiplex Fluorescent Assay
  • Recommended Controls
  • Product Insert/Data Sheet
    No Related Documents...

Specifications

Gene :PTEN
Species* :Mouse
Species (common):House Mouse
Entrez Gene ID :19211
Gene Alias :2310035O07Rik,A130070J02Rik,AI463227,B430203M17Rik,MMAC1,TEP1
Accession No:NM_008960.2
Target Region [Base Pairs (bp)] :903 - 1906
No. of Pairs :20
Assay Compatibility :RNAscope™ 2.5 HD Duplex Assay,RNAscope™ Multiplex Fluorescent Assay
Shipping Temp :2-8 C
Storage Temp :2-8 C
Shelf Life :24 months from the date of manufacturing
* Please check expiration dates on the reagent package
Probe description :Mus musculus phosphatase and tensin homolog (Pten) mRNA
Channel :2
RNAscope™ Assay Platform :Manual Assay RNAscope
RNAscope™ 2.5 HD Duplex Assay,RNAscope™ Multiplex Fluorescent Assay
No Related Documents...
ITEM
RNAscope™ 2.5 LS Probe- Hs-PTEN-XMmuPt-C2 ?
Cat No. 509418-C2
Automated Assay for Leica Systems - RNAscope

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  • View Details

    Specifications

    Gene :PTEN
    Species* :Human
    Species (common):Human
    Entrez Gene ID :5728
    Gene Alias :10q23del,BZS,CWS1,DEC,GLM2,MHAM,MMAC11,TEP1,PTEN
    Accession No:NM_000314.4
    Target Region [Base Pairs (bp)] :909 - 1102
    No. of Pairs :20
    Assay Compatibility :RNAscope™ 2.5 LS Duplex Reagent Kit,RNAscope™ LS Multiplex Fluorescent Reagent Kit
    Shipping Temp :2-8 C
    Storage Temp :2-8 C
    Shelf Life :24 months from the date of manufacturing
    * Please check expiration dates on the reagent package
    Probe description :Homo sapiens phosphatase and tensin homolog (PTEN) mRNA
    Channel :2
    RNAscope™ Assay Platform :Automated Assay for Leica Systems - RNAscope
  • Assay Compatibility
    RNAscope™ 2.5 LS Duplex Reagent Kit,RNAscope™ LS Multiplex Fluorescent Reagent Kit
  • Recommended Controls
  • Product Insert/Data Sheet

    No Related Documents found...

Specifications

Gene :PTEN
Species* :Human
Species (common):Human
Entrez Gene ID :5728
Gene Alias :10q23del,BZS,CWS1,DEC,GLM2,MHAM,MMAC11,TEP1,PTEN
Accession No:NM_000314.4
Target Region [Base Pairs (bp)] :909 - 1102
No. of Pairs :20
Assay Compatibility :RNAscope™ 2.5 LS Duplex Reagent Kit,RNAscope™ LS Multiplex Fluorescent Reagent Kit
Shipping Temp :2-8 C
Storage Temp :2-8 C
Shelf Life :24 months from the date of manufacturing
* Please check expiration dates on the reagent package
Probe description :Homo sapiens phosphatase and tensin homolog (PTEN) mRNA
Channel :2
RNAscope™ Assay Platform :Automated Assay for Leica Systems - RNAscope
RNAscope™ 2.5 LS Duplex Reagent Kit,RNAscope™ LS Multiplex Fluorescent Reagent Kit

No Related Documents found...

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Description
sense
Example: Hs-LAG3-sense
Standard probes for RNA detection are in antisense. Sense probe is reverse complent to the corresponding antisense probe.
Intron#
Example: Mm-Htt-intron2
Probe targets the indicated intron in the target gene, commonly used for pre-mRNA detection
Pool/Pan
Example: Hs-CD3-pool (Hs-CD3D, Hs-CD3E, Hs-CD3G)
A mixture of multiple probe sets targeting multiple genes or transcripts
No-XSp
Example: Hs-PDGFB-No-XMm
Does not cross detect with the species (Sp)
XSp
Example: Rn-Pde9a-XMm
designed to cross detect with the species (Sp)
O#
Example: Mm-Islr-O1
Alternative design targeting different regions of the same transcript or isoforms
CDS
Example: Hs-SLC31A-CDS
Probe targets the protein-coding sequence only
EnEmProbe targets exons n and m
En-EmProbe targets region from exon n to exon m
Retired Nomenclature
tvn
Example: Hs-LEPR-tv1
Designed to target transcript variant n
ORF
Example: Hs-ACVRL1-ORF
Probe targets open reading frame
UTR
Example: Hs-HTT-UTR-C3
Probe targets the untranslated region (non-protein-coding region) only
5UTR
Example: Hs-GNRHR-5UTR
Probe targets the 5' untranslated region only
3UTR
Example: Rn-Npy1r-3UTR
Probe targets the 3' untranslated region only
Pan
Example: Pool
A mixture of multiple probe sets targeting multiple genes or transcripts

Enabling research, drug development (CDx) and diagnostics

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