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Probes for MUC5AC

ACD can configure probes for the various manual and automated assays for MUC5AC for RNAscope Assay, or for Basescope Assay compatible for your species of interest.

  • Probes for MUC5AC (0)
  • Kits & Accessories (0)
  • Support & Documents (0)
  • Publications (1)
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Refine Probe List

Content for comparison

Gene

  • MUC5AC (4) Apply MUC5AC filter
  • MUC5B (3) Apply MUC5B filter
  • MUC4 (2) Apply MUC4 filter
  • MUC6 (2) Apply MUC6 filter
  • CCKBR (1) Apply CCKBR filter
  • Gif (1) Apply Gif filter
  • Lgr5 (1) Apply Lgr5 filter
  • MUC2 (1) Apply MUC2 filter
  • Xbp1 (1) Apply Xbp1 filter
  • Sostdc1 (1) Apply Sostdc1 filter
  • (-) Remove HSPA5 filter HSPA5 (1)
  • Ern1 (1) Apply Ern1 filter
  • Chromogranin A (1) Apply Chromogranin A filter
  • Reg-4 (1) Apply Reg-4 filter
  • Mmp7 (1) Apply Mmp7 filter
  • SPDEF (1) Apply SPDEF filter
  • ERN2 (1) Apply ERN2 filter
  • Mist1 (1) Apply Mist1 filter
  • Ki67 (1) Apply Ki67 filter
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  • CCSP (1) Apply CCSP filter
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  • V- nCoV2019 -S (1) Apply V- nCoV2019 -S filter
  • Hs- MUC5B (1) Apply Hs- MUC5B filter
  • Hs- MUC5AC (1) Apply Hs- MUC5AC filter
  • Hs- IL1B (1) Apply Hs- IL1B filter
  • Hs- IL6 (1) Apply Hs- IL6 filter
  • Hs- AREG (1) Apply Hs- AREG filter
  • Hs- CD68 (1) Apply Hs- CD68 filter
  • Hs- MPO (1) Apply Hs- MPO filter
  • EB- 16S-rRNA (1) Apply EB- 16S-rRNA filter
  • Hs- XBP1 -tv2-1zz (1) Apply Hs- XBP1 -tv2-1zz filter
  • SARS-CoV-2 N1 (1) Apply SARS-CoV-2 N1 filter
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Research area

  • Other (1) Apply Other filter

Category

  • (-) Remove Publications filter Publications (1)
XBP1S Regulates MUC5B in a Promoter Variant-Dependent Pathway in IPF Airway Epithelia.

Am J Respir Crit Care Med.

2019 Apr 11

Chen G, Ribeiro CMP, Sun L, Okuda K, Kato T, Gilmore RC, Martino MB, Dang H, Abzhanova A, Lin JM, Hull-Ryde EA, Volmer AS, Randell SH, Livraghi-Butrico A, Deng Y, Scherer PE, Stripp BR, O'Neal WK, Boucher RC.
PMID: 30973754 | DOI: 10.1164/rccm.201810-1972OC

Abstract

RATIONALE:

The goal was to connect elements of IPF pathogenesis, including: chronic endoplasmic reticulum stress in respiratory epithelia associated with injury/inflammation and remodeling; distal airway mucus obstruction and honeycomb cyst formation with accumulation of MUC5B; and associations between IPF risk and polymorphisms in the MUC5B promoter.

OBJECTIVES:

Test whether the ER stress sensor protein ER-to-nucleus signaling 2 (ERN2) and its downstream effector, the spliced form of x-box binding protein 1 (XBP1S), regulate MUC5B expression and differentially activate the MUC5B promoter variant in respiratory epithelia.

METHODS AND MEASUREMENTS:

Primary human airway epithelia (HAE), transgenic mouse models, human IPF lung tissues, and cell lines expressing XBP1S and MUC5B promoters were used to explore relationships between the ERN2/XBP1S pathway and MUC5B. An inhibitor of the pathway, KIRA6, and XBP1 CRISPR-Cas9 were used in HAE to explore therapeutic potential.

RESULTS:

ERN2 regulated both MUC5B and MUC5AC mRNAs. Downstream XBP1S selectively promoted MUC5B expression in vitro and in distal murine airway epithelia in vivo. XBP1S bound to the proximal region of the MUC5B promoter and differentially up-regulated MUC5B expression in the context of the MUC5B promoter rs35705950 variant. High levels of ERN2 and XBP1S were associated with excessive MUC5B mRNAs in distal airways of human IPF lungs. Cytokine-induced MUC5B expression in HAE was inhibited by KIRA6 and XBP1 CRISPR-Cas9.

CONCLUSION:

A positive feedback bistable ERN2-XBP1S pathway regulates MUC5B-dominated mucus obstruction in IPF, providing a UPR-dependent mechanism linking the MUC5B promoter rs35705950 polymorphism with IPF pathogenesis. Inhibiting ERN2-dependent pathways/elements may provide a therapeutic option for IPF.

X
Description
sense
Example: Hs-LAG3-sense
Standard probes for RNA detection are in antisense. Sense probe is reverse complent to the corresponding antisense probe.
Intron#
Example: Mm-Htt-intron2
Probe targets the indicated intron in the target gene, commonly used for pre-mRNA detection
Pool/Pan
Example: Hs-CD3-pool (Hs-CD3D, Hs-CD3E, Hs-CD3G)
A mixture of multiple probe sets targeting multiple genes or transcripts
No-XSp
Example: Hs-PDGFB-No-XMm
Does not cross detect with the species (Sp)
XSp
Example: Rn-Pde9a-XMm
designed to cross detect with the species (Sp)
O#
Example: Mm-Islr-O1
Alternative design targeting different regions of the same transcript or isoforms
CDS
Example: Hs-SLC31A-CDS
Probe targets the protein-coding sequence only
EnEmProbe targets exons n and m
En-EmProbe targets region from exon n to exon m
Retired Nomenclature
tvn
Example: Hs-LEPR-tv1
Designed to target transcript variant n
ORF
Example: Hs-ACVRL1-ORF
Probe targets open reading frame
UTR
Example: Hs-HTT-UTR-C3
Probe targets the untranslated region (non-protein-coding region) only
5UTR
Example: Hs-GNRHR-5UTR
Probe targets the 5' untranslated region only
3UTR
Example: Rn-Npy1r-3UTR
Probe targets the 3' untranslated region only
Pan
Example: Pool
A mixture of multiple probe sets targeting multiple genes or transcripts

Enabling research, drug development (CDx) and diagnostics

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