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Search

Probes for LGR5

ACD can configure probes for the various manual and automated assays for LGR5 for RNAscope Assay, or for Basescope Assay compatible for your species of interest.

Your search for "LGR5" returned results. Search for our Top genes vglut2, gad67, brca1

    Refine Probe List

    Content for comparison

    Gene

    • Lgr5 (152) Apply Lgr5 filter
    • Axin2 (18) Apply Axin2 filter
    • OLFM4 (16) Apply OLFM4 filter
    • OLFM4 (11) Apply OLFM4 filter
    • Lgr4 (9) Apply Lgr4 filter
    • Sox9 (7) Apply Sox9 filter
    • Lgr6 (7) Apply Lgr6 filter
    • GLI1 (6) Apply GLI1 filter
    • TBD (6) Apply TBD filter
    • ASCL2 (5) Apply ASCL2 filter
    • Rspo3 (5) Apply Rspo3 filter
    • Wnt2b (5) Apply Wnt2b filter
    • Rspo1 (4) Apply Rspo1 filter
    • Rspo2 (4) Apply Rspo2 filter
    • Wnt5a (4) Apply Wnt5a filter
    • PDGFRA (4) Apply PDGFRA filter
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    • WNT2 (4) Apply WNT2 filter
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    • ASCL2 (4) Apply ASCL2 filter
    • Wnt4 (3) Apply Wnt4 filter
    • Wnt7b (3) Apply Wnt7b filter
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    • Ptch1 (3) Apply Ptch1 filter
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    • Olfml3 (3) Apply Olfml3 filter
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    • BMI1 (2) Apply BMI1 filter
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    • Gif (2) Apply Gif filter
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    • CLU (2) Apply CLU filter
    • (-) Remove Dll1 filter Dll1 (2)
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    • (-) Remove FGFR2 filter FGFR2 (2)
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    Product

    • RNAscope 2.5 HD Red assay (2) Apply RNAscope 2.5 HD Red assay filter
    • RNAscope 2.5 HD Duplex (1) Apply RNAscope 2.5 HD Duplex filter

    Research area

    • Development (2) Apply Development filter
    • Other (2) Apply Other filter

    Category

    • (-) Remove Publications filter Publications (4)
    Partial male-to-female reprogramming of mouse fetal testis by sertoli cell ablation

    Development (Cambridge, England)

    2023 Jun 28

    Imaimatsu, K;Hiramatsu, R;Tomita, A;Itabashi, H;Kanai, Y;
    PMID: 37376880 | DOI: 10.1242/dev.201660

    Temporal transcription profiles of fetal testes with Sertoli cell ablation were examined in 4-day culture using a diphtheria toxin (DT)-dependent cell knockout system in AMH-TRECK transgenic (Tg) mice. RNA analysis revealed that ovarian-specific genes, including Foxl2, were ectopically expressed in DT-treated Tg testis explants initiated at embryonic days 12.5-13.5. FOXL2-positive cells were ectopically observed in two testicular regions-near the testicular surface epithelia and around its adjacent mesonephros. The surface FOXL2-positive cells, together with ectopic expression of Lgr5 and Gng13 (markers of ovarian cords), were derived from the testis epithelia/subepithelia, whereas another FOXL2-positive population was the 3βHSD-negative stroma near the mesonephros. In addition to high expression of Fgfr1/Fgfr2 and heparan sulfate proteoglycan (a reservoir for FGF ligand) in these two sites, exogenous FGF9 additives repressed DT-dependent Foxl2 upregulation in Tg testes. These findings imply retention of Foxl2 inducibility in the surface epithelia and peri-mesonephric stroma of the testicular parenchyma, in which certain paracrine signals, including FGF9 derived from fetal Sertoli cells, repress feminization in these two sites of the early fetal testis.
    Charting human development using a multi-endodermal organ atlas and organoid models

    Cell

    2021 May 17

    Yu, Q;Kilik, U;Holloway, EM;Tsai, YH;Harmel, C;Wu, A;Wu, JH;Czerwinski, M;Childs, CJ;He, Z;Capeling, MM;Huang, S;Glass, IA;Higgins, PDR;Treutlein, B;Spence, JR;Camp, JG;
    PMID: 34019796 | DOI: 10.1016/j.cell.2021.04.028

    Organs are composed of diverse cell types that traverse transient states during organogenesis. To interrogate this diversity during human development, we generate a single-cell transcriptome atlas from multiple developing endodermal organs of the respiratory and gastrointestinal tract. We illuminate cell states, transcription factors, and organ-specific epithelial stem cell and mesenchyme interactions across lineages. We implement the atlas as a high-dimensional search space to benchmark human pluripotent stem cell (hPSC)-derived intestinal organoids (HIOs) under multiple culture conditions. We show that HIOs recapitulate reference cell states and use HIOs to reconstruct the molecular dynamics of intestinal epithelium and mesenchyme emergence. We show that the mesenchyme-derived niche cue NRG1 enhances intestinal stem cell maturation in vitro and that the homeobox transcription factor CDX2 is required for regionalization of intestinal epithelium and mesenchyme in humans. This work combines cell atlases and organoid technologies to understand how human organ development is orchestrated.
    Radical and lunatic fringes modulate notch ligands to support mammalian intestinal homeostasis

    Elife.

    2018 Apr 09

    Kadur Lakshminarasimha Murthy P, Srinivasan T, Bochter MS, Xi R, Varanko AK, Tung KL, Semerci F, Xu K, Maletic-Savatic M, Cole SE, Shen X.
    PMID: 29629872 | DOI: 10.7554/eLife.35710

    Notch signalling maintains stem cell regeneration at the mouse intestinal crypt base and balances the absorptive and secretory lineages in the upper crypt and villus. Here we report the role of Fringe family of glycosyltransferases in modulating Notch activity in the two compartments. At the crypt base, RFNG is enriched in the Paneth cells and increases cell surface expression of DLL1 and DLL4. This promotes Notch activity in the neighbouring Lgr5+ stem cells assisting their self-renewal. Expressed by various secretory cells in the upper crypt and villus, LFNG promotes DLL surface expression and suppresses the secretory lineage . Hence, in the intestinal epithelium, Fringes are present in the ligand-presenting 'sender' secretory cells and promote Notch activity in the neighbouring 'receiver' cells. Fringes thereby provide for targeted modulation of Notch activity and thus the cell fate in the stem cell zone, or the upper crypt and villus.

    Constitutive activation of hedgehog signaling adversely affects epithelial cell fate during palatal fusion

    Dev Biol.

    2018 Jul 05

    Li J, Yuan Y, He J, Feng J, Han X, Jing J, Ho TV, Xu J, Chai Y.
    PMID: 29981310 | DOI: 10.1016/j.ydbio.2018.07.003

    Cleft palate is one of the most common craniofacial congenital defects in humans. It is associated with multiple genetic and environmental risk factors, including mutations in the genes encoding signaling molecules in the sonic hedgehog (Shh) pathway, which are risk factors for cleft palate in both humans and mice. However, the function of Shh signaling in the palatal epithelium during palatal fusion remains largely unknown. Although components of the Shh pathway are localized in the palatal epithelium, specific inhibition of Shh signaling in palatal epithelium does not affect palatogenesis. We therefore utilized a hedgehog (Hh) signaling gain-of-function mouse model, K14-Cre;R26SmoM2, to uncover the role of Shh signaling in the palatal epithelium during palatal fusion. In this study, we discovered that constitutive activation of Hh signaling in the palatal epithelium results in submucous cleft palate and persistence of the medial edge epithelium (MEE). Further investigation revealed that precise downregulation of Shh signaling is required at a specific time point in the MEE during palatal fusion. Upregulation of Hh signaling in the palatal epithelium maintains the proliferation of MEE cells. This may be due to a dysfunctional p63/Irf6 regulatory loop. The resistance of MEE cells to apoptosis is likely conferred by enhancement of a cell adhesion network through the maintenance of p63 expression. Collectively, our data illustrate that persistent Hh signaling in the palatal epithelium contributes to the etiology and pathogenesis of submucous cleft palate through its interaction with a p63/Irf6-dependent biological regulatory loop and through a p63-induced cell adhesion network.

    X
    Description
    sense
    Example: Hs-LAG3-sense
    Standard probes for RNA detection are in antisense. Sense probe is reverse complent to the corresponding antisense probe.
    Intron#
    Example: Mm-Htt-intron2
    Probe targets the indicated intron in the target gene, commonly used for pre-mRNA detection
    Pool/Pan
    Example: Hs-CD3-pool (Hs-CD3D, Hs-CD3E, Hs-CD3G)
    A mixture of multiple probe sets targeting multiple genes or transcripts
    No-XSp
    Example: Hs-PDGFB-No-XMm
    Does not cross detect with the species (Sp)
    XSp
    Example: Rn-Pde9a-XMm
    designed to cross detect with the species (Sp)
    O#
    Example: Mm-Islr-O1
    Alternative design targeting different regions of the same transcript or isoforms
    CDS
    Example: Hs-SLC31A-CDS
    Probe targets the protein-coding sequence only
    EnEmProbe targets exons n and m
    En-EmProbe targets region from exon n to exon m
    Retired Nomenclature
    tvn
    Example: Hs-LEPR-tv1
    Designed to target transcript variant n
    ORF
    Example: Hs-ACVRL1-ORF
    Probe targets open reading frame
    UTR
    Example: Hs-HTT-UTR-C3
    Probe targets the untranslated region (non-protein-coding region) only
    5UTR
    Example: Hs-GNRHR-5UTR
    Probe targets the 5' untranslated region only
    3UTR
    Example: Rn-Npy1r-3UTR
    Probe targets the 3' untranslated region only
    Pan
    Example: Pool
    A mixture of multiple probe sets targeting multiple genes or transcripts

    Enabling research, drug development (CDx) and diagnostics

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