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Search

Probes for LGR5

ACD can configure probes for the various manual and automated assays for LGR5 for RNAscope Assay, or for Basescope Assay compatible for your species of interest.

  • Probes for LGR5 (0)
  • Kits & Accessories (0)
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  • Publications (3)
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Refine Probe List

Content for comparison

Gene

  • Lgr5 (18) Apply Lgr5 filter
  • (-) Remove Sox9 filter Sox9 (3)
  • PDGFRA (3) Apply PDGFRA filter
  • Axin2 (2) Apply Axin2 filter
  • OLFM4 (2) Apply OLFM4 filter
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  • Sftpb (2) Apply Sftpb filter
  • SCGB3A2 (2) Apply SCGB3A2 filter
  • ERBB2 (1) Apply ERBB2 filter
  • ASCL2 (1) Apply ASCL2 filter
  • Bmp4 (1) Apply Bmp4 filter
  • CD68 (1) Apply CD68 filter
  • BMI1 (1) Apply BMI1 filter
  • CCND1 (1) Apply CCND1 filter
  • Rspo1 (1) Apply Rspo1 filter
  • Rspo2 (1) Apply Rspo2 filter
  • Rspo3 (1) Apply Rspo3 filter
  • Rspo4 (1) Apply Rspo4 filter
  • CD44 (1) Apply CD44 filter
  • TMEM45A (1) Apply TMEM45A filter
  • PAX8 (1) Apply PAX8 filter
  • CLU (1) Apply CLU filter
  • EGR1 (1) Apply EGR1 filter
  • EGF (1) Apply EGF filter
  • EGFR (1) Apply EGFR filter
  • EPCAM (1) Apply EPCAM filter
  • EREG (1) Apply EREG filter
  • DCC (1) Apply DCC filter
  • GATA4 (1) Apply GATA4 filter
  • Agtr2 (1) Apply Agtr2 filter
  • HES1 (1) Apply HES1 filter
  • Notch1 (1) Apply Notch1 filter
  • Lgr6 (1) Apply Lgr6 filter
  • Wnt2b (1) Apply Wnt2b filter
  • Wnt3a (1) Apply Wnt3a filter
  • Hopx (1) Apply Hopx filter
  • Spp1 (1) Apply Spp1 filter
  • MUC2 (1) Apply MUC2 filter
  • FGFR4 (1) Apply FGFR4 filter
  • POU5F1 (1) Apply POU5F1 filter
  • Ntn1 (1) Apply Ntn1 filter
  • WNT2 (1) Apply WNT2 filter
  • Cdh5 (1) Apply Cdh5 filter
  • Nr5a1 (1) Apply Nr5a1 filter
  • Foxj1 (1) Apply Foxj1 filter
  • Foxa2 (1) Apply Foxa2 filter
  • Apln (1) Apply Apln filter
  • Emp1 (1) Apply Emp1 filter
  • Lgr4 (1) Apply Lgr4 filter
  • P2ry12 (1) Apply P2ry12 filter

Product

  • (-) Remove RNAscope Multiplex Fluorescent Assay filter RNAscope Multiplex Fluorescent Assay (3)

Research area

  • Development (3) Apply Development filter

Category

  • Publications (3) Apply Publications filter
Single-cell roadmap of human gonadal development

Nature

2022 Jul 01

Garcia-Alonso, L;Lorenzi, V;Mazzeo, CI;Alves-Lopes, JP;Roberts, K;Sancho-Serra, C;Engelbert, J;Marečková, M;Gruhn, WH;Botting, RA;Li, T;Crespo, B;van Dongen, S;Kiselev, VY;Prigmore, E;Herbert, M;Moffett, A;Chédotal, A;Bayraktar, OA;Surani, A;Haniffa, M;Vento-Tormo, R;
PMID: 35794482 | DOI: 10.1038/s41586-022-04918-4

Gonadal development is a complex process that involves sex determination followed by divergent maturation into either testes or ovaries1. Historically, limited tissue accessibility, a lack of reliable in vitro models and critical differences between humans and mice have hampered our knowledge of human gonadogenesis, despite its importance in gonadal conditions and infertility. Here, we generated a comprehensive map of first- and second-trimester human gonads using a combination of single-cell and spatial transcriptomics, chromatin accessibility assays and fluorescent microscopy. We extracted human-specific regulatory programmes that control the development of germline and somatic cell lineages by profiling equivalent developmental stages in mice. In both species, we define the somatic cell states present at the time of sex specification, including the bipotent early supporting population that, in males, upregulates the testis-determining factor SRY and sPAX8s, a gonadal lineage located at the gonadal-mesonephric interface. In females, we resolve the cellular and molecular events that give rise to the first and second waves of granulosa cells that compartmentalize the developing ovary to modulate germ cell differentiation. In males, we identify human SIGLEC15+ and TREM2+ fetal testicular macrophages, which signal to somatic cells outside and inside the developing testis cords, respectively. This study provides a comprehensive spatiotemporal map of human and mouse gonadal differentiation, which can guide in vitro gonadogenesis.
R-SPONDIN2+ mesenchymal cells form the bud tip progenitor niche during human lung development

Developmental cell

2022 Jun 07

Hein, RFC;Wu, JH;Holloway, EM;Frum, T;Conchola, AS;Tsai, YH;Wu, A;Fine, AS;Miller, AJ;Szenker-Ravi, E;Yan, KS;Kuo, CJ;Glass, I;Reversade, B;Spence, JR;
PMID: 35679862 | DOI: 10.1016/j.devcel.2022.05.010

The human respiratory epithelium is derived from a progenitor cell in the distal buds of the developing lung. These "bud tip progenitors" are regulated by reciprocal signaling with surrounding mesenchyme; however, mesenchymal heterogeneity and function in the developing human lung are poorly understood. We interrogated single-cell RNA sequencing data from multiple human lung specimens and identified a mesenchymal cell population present during development that is highly enriched for expression of the WNT agonist RSPO2, and we found that the adjacent bud tip progenitors are enriched for the RSPO2 receptor LGR5. Functional experiments using organoid models, explant cultures, and FACS-isolated RSPO2+ mesenchyme show that RSPO2 is a critical niche cue that potentiates WNT signaling in bud tip progenitors to support their maintenance and multipotency.
New Stable Cell Lines Derived from the Proximal and Distal Intestine of Rainbow Trout (Oncorhynchus mykiss) Retain Several Properties Observed In Vivo

Cells

2021 Jun 19

Pasquariello, R;Verdile, N;Pavlovic, R;Panseri, S;Schirmer, K;Brevini, TAL;Gandolfi, F;
PMID: 34205481 | DOI: 10.3390/cells10061555

We derived two novel cell lines from rainbow trout (RT) proximal (RTpi-MI) and distal intestine (RTdi-MI) and compared them with the previously established continuous cell line RTgutGC. Intestinal stem cells, differentiating and differentiated epithelial cells, and connective cells were found in all cell lines. The cell lines formed a polarized barrier, which was not permeable to large molecules and absorbed proline and glucose. High seeding density induced their differentiation into more mature phenotypes, as indicated by the downregulation of intestinal stem cell-related genes (i.e., sox9, hopx and lgr5), whereas alkaline phosphatase activity was upregulated. Other enterocyte markers (i.e., sglt1 and pept1), however, were not regulated as expected. In all cell lines, the presence of a mixed population of epithelial and stromal cells was characterized for the first time. The expression by the stromal component of lgr5, a stem cell niche regulatory molecule, may explain why these lines proliferate stably in vitro. Although most parameters were conserved among the three cell lines, some significant differences were observed, suggesting that characteristics typical of each tract are partly conserved in vitro as well.
X
Description
sense
Example: Hs-LAG3-sense
Standard probes for RNA detection are in antisense. Sense probe is reverse complent to the corresponding antisense probe.
Intron#
Example: Mm-Htt-intron2
Probe targets the indicated intron in the target gene, commonly used for pre-mRNA detection
Pool/Pan
Example: Hs-CD3-pool (Hs-CD3D, Hs-CD3E, Hs-CD3G)
A mixture of multiple probe sets targeting multiple genes or transcripts
No-XSp
Example: Hs-PDGFB-No-XMm
Does not cross detect with the species (Sp)
XSp
Example: Rn-Pde9a-XMm
designed to cross detect with the species (Sp)
O#
Example: Mm-Islr-O1
Alternative design targeting different regions of the same transcript or isoforms
CDS
Example: Hs-SLC31A-CDS
Probe targets the protein-coding sequence only
EnEmProbe targets exons n and m
En-EmProbe targets region from exon n to exon m
Retired Nomenclature
tvn
Example: Hs-LEPR-tv1
Designed to target transcript variant n
ORF
Example: Hs-ACVRL1-ORF
Probe targets open reading frame
UTR
Example: Hs-HTT-UTR-C3
Probe targets the untranslated region (non-protein-coding region) only
5UTR
Example: Hs-GNRHR-5UTR
Probe targets the 5' untranslated region only
3UTR
Example: Rn-Npy1r-3UTR
Probe targets the 3' untranslated region only
Pan
Example: Pool
A mixture of multiple probe sets targeting multiple genes or transcripts

Enabling research, drug development (CDx) and diagnostics

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