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Search

Probes for LGR5

ACD can configure probes for the various manual and automated assays for LGR5 for RNAscope Assay, or for Basescope Assay compatible for your species of interest.

  • Probes for LGR5 (0)
  • Kits & Accessories (0)
  • Support & Documents (0)
  • Publications (3)
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Refine Probe List

Content for comparison

Gene

  • Lgr5 (152) Apply Lgr5 filter
  • Axin2 (18) Apply Axin2 filter
  • OLFM4 (16) Apply OLFM4 filter
  • OLFM4 (11) Apply OLFM4 filter
  • Lgr4 (9) Apply Lgr4 filter
  • Sox9 (7) Apply Sox9 filter
  • Lgr6 (7) Apply Lgr6 filter
  • GLI1 (6) Apply GLI1 filter
  • TBD (6) Apply TBD filter
  • ASCL2 (5) Apply ASCL2 filter
  • Rspo3 (5) Apply Rspo3 filter
  • Wnt2b (5) Apply Wnt2b filter
  • Rspo1 (4) Apply Rspo1 filter
  • Rspo2 (4) Apply Rspo2 filter
  • Wnt5a (4) Apply Wnt5a filter
  • PDGFRA (4) Apply PDGFRA filter
  • RNF43 (4) Apply RNF43 filter
  • WNT2 (4) Apply WNT2 filter
  • Alpi (4) Apply Alpi filter
  • ASCL2 (4) Apply ASCL2 filter
  • Wnt4 (3) Apply Wnt4 filter
  • Wnt7b (3) Apply Wnt7b filter
  • CD34 (3) Apply CD34 filter
  • Rspo4 (3) Apply Rspo4 filter
  • Ptch1 (3) Apply Ptch1 filter
  • Hopx (3) Apply Hopx filter
  • NOTUM (3) Apply NOTUM filter
  • LRIG1 (3) Apply LRIG1 filter
  • EPHB2 (3) Apply EPHB2 filter
  • (-) Remove Olfml3 filter Olfml3 (3)
  • Nedd4 (3) Apply Nedd4 filter
  • Nedd4l (3) Apply Nedd4l filter
  • Dkk3 (2) Apply Dkk3 filter
  • Wnt10a (2) Apply Wnt10a filter
  • Wnt10b (2) Apply Wnt10b filter
  • Wnt7a (2) Apply Wnt7a filter
  • BMI1 (2) Apply BMI1 filter
  • CCND1 (2) Apply CCND1 filter
  • Atoh1 (2) Apply Atoh1 filter
  • Gif (2) Apply Gif filter
  • CD44 (2) Apply CD44 filter
  • CLU (2) Apply CLU filter
  • Dll1 (2) Apply Dll1 filter
  • KRT79 (2) Apply KRT79 filter
  • FGFR2 (2) Apply FGFR2 filter
  • GREM1 (2) Apply GREM1 filter
  • Fzd5 (2) Apply Fzd5 filter
  • Wnt3a (2) Apply Wnt3a filter
  • MUC6 (2) Apply MUC6 filter
  • EPHB2 (2) Apply EPHB2 filter

Product

  • RNAscope 2.5 HD Red assay (1) Apply RNAscope 2.5 HD Red assay filter
  • RNAscope 2.5 LS Assay (1) Apply RNAscope 2.5 LS Assay filter

Research area

  • Cancer (1) Apply Cancer filter
  • Gastro (1) Apply Gastro filter
  • Stem cell (1) Apply Stem cell filter

Category

  • Publications (3) Apply Publications filter
NEDD4 and NEDD4L regulate Wnt signalling and intestinal stem cell priming by degrading LGR5 receptor

EMBO j

2019 Dec 23

Novellasdemunt L, Kucharska A, Jamieson C, Prange-Barczynska M, Baulies A, Antas P, van der Vaart J, Gehart H, Maurice MM, Li VS
PMID: 31867777 | DOI: 10.15252/embj.2019102771

The intestinal stem cell (ISC) marker LGR5 is a receptor for R-spondin (RSPO) that functions to potentiate Wnt signalling in the proliferating crypt. It has been recently shown that Wnt plays a priming role for ISC self-renewal by inducing RSPO receptor LGR5 expression. Despite its pivotal role in homeostasis, regeneration and cancer, little is known about the post-translational regulation of LGR5. Here, we show that the HECT-domain E3 ligases NEDD4 and NEDD4L are expressed in the crypt stem cell regions and regulate ISC priming by degrading LGR receptors. Loss of Nedd4 and Nedd4l enhances ISC proliferation, increases sensitivity to RSPO stimulation and accelerates tumour development in Apcmin mice with increased numbers of high-grade adenomas. Mechanistically, we find that both NEDD4 and NEDD4L negatively regulate Wnt/?-catenin signalling by targeting LGR5 receptor and DVL2 for proteasomal and lysosomal degradation. Our findings unveil the previously unreported post-translational control of LGR receptors via NEDD4/NEDD4L to regulate ISC priming. Inactivation of NEDD4 and NEDD4L increases Wnt activation and ISC numbers, which subsequently enhances tumour predisposition and progression.
L1CAM defines the regenerative origin of metastasis-initiating cells in colorectal cancer

Nat Cancer

2020 Jan 13

Karuna Ganesh, Harihar Basnet, Yasemin Kaygusuz, Ashley M. Laughney, Lan He, Roshan Sharma, Kevin P. O�Rourke, Vincent P. Reuter, Yun-Han Huang, Mesruh Turkekul, Ekrem Emrah Er, Ignas Masilionis, Katia Manova-Todorova, Martin R. Weiser, Leonard B. Saltz, Julio Garcia-Aguilar, Richard Koche, Scott W. Lowe, Dana Pe�er, Jinru Shia & Joan Massagu�
| DOI: 10.1038/s43018-019-0006-x

Metastasis-initiating cells with stem-like properties drive cancer lethality, yet their origins and relationship to primary-tumor-initiating stem cells are not known. We show that L1CAM+ cells in human colorectal cancer (CRC) have metastasis-initiating capacity, and we define their relationship to tissue regeneration. L1CAM is not expressed in the homeostatic intestinal epithelium, but is induced and required for epithelial regeneration following colitis and in CRC organoid growth. By using human tissues and mouse models, we show that L1CAM is dispensable for adenoma initiation but required for orthotopic carcinoma propagation, liver metastatic colonization and chemoresistance. L1CAMhigh cells partially overlap with LGR5high stem-like cells in human CRC organoids. Disruption of intercellular epithelial contacts causes E-cadherin�REST transcriptional derepression of L1CAM, switching chemoresistant CRC progenitors from an L1CAMlow to an L1CAMhigh state. Thus, L1CAM dependency emerges in regenerative intestinal cells when epithelial integrity is lost, a phenotype of wound healing deployed in metastasis-initiating cells.
ATF2 and ATF7 Are Critical Mediators of Intestinal Epithelial Repair

Cell Mol Gastroenterol Hepatol.

2020 Jan 17

Meijer BJ1, Giugliano FP, Baan B, van der Meer JHM, Meisner S, van Roest M, Koelink PJ, de Boer RJ, Jones N, Breitwieser W, van der Wel NN, Wildenberg ME, van den Brink GR, Heijmans J, Muncan V
PMID: 31958521 | DOI: 10.1016/j.jcmgh.2020.01.005

BACKGROUND & AIMS: Activation factor-1 transcription factor family members activating transcription factors 2 and 7 (ATF2 and ATF7) have highly redundant functions owing to highly homologous DNA binding sites. Their role in intestinal epithelial homeostasis and repair is unknown. Here, we assessed the role of these proteins in these conditions in an intestine-specific mouse model. METHODS: We performed in vivo and ex vivo experiments using Villin-CreERT2Atf2fl/flAtf7ko/ko mice. We investigated the effects of intestinal epithelium-specific deletion of the Atf2 DNA binding region in Atf7-/- mice on cellular proliferation, differentiation, apoptosis, and epithelial barrier function under homeostatic conditions. Subsequently, we exposed mice to 2% dextran sulfate sodium (DSS) for 7 days and 12 Gy whole-body irradiation and assessed the response to epithelial damage. RESULTS: Activating phosphorylation of ATF2 and ATF7 was detected mainly in the crypts of the small intestine and the lower crypt region of the colonic epithelium. Under homeostatic conditions, no major phenotypic changes were detectable in the intestine of ATF mutant mice. However, on DSS exposure or whole-body irradiation, the intestinal epithelium showed a clearly impaired regenerative response. Mutant mice developed severe ulceration and inflammation associated with increased epithelial apoptosis on DSS exposure and were less able to regenerate colonic crypts on irradiation. In vitro, organoids derived from double-mutant epithelium had a growth disadvantage compared with wild-type organoids, impaired wound healing capacity in scratch assay, and increased sensitivity to tumor necrosis factor-?-induced damage. CONCLUSIONS: ATF2 and ATF7 are dispensable for epithelial homeostasis, but are required to maintain epithelial regenerative capacity and protect against cell death during intestinal epithelial damage and repair.
X
Description
sense
Example: Hs-LAG3-sense
Standard probes for RNA detection are in antisense. Sense probe is reverse complent to the corresponding antisense probe.
Intron#
Example: Mm-Htt-intron2
Probe targets the indicated intron in the target gene, commonly used for pre-mRNA detection
Pool/Pan
Example: Hs-CD3-pool (Hs-CD3D, Hs-CD3E, Hs-CD3G)
A mixture of multiple probe sets targeting multiple genes or transcripts
No-XSp
Example: Hs-PDGFB-No-XMm
Does not cross detect with the species (Sp)
XSp
Example: Rn-Pde9a-XMm
designed to cross detect with the species (Sp)
O#
Example: Mm-Islr-O1
Alternative design targeting different regions of the same transcript or isoforms
CDS
Example: Hs-SLC31A-CDS
Probe targets the protein-coding sequence only
EnEmProbe targets exons n and m
En-EmProbe targets region from exon n to exon m
Retired Nomenclature
tvn
Example: Hs-LEPR-tv1
Designed to target transcript variant n
ORF
Example: Hs-ACVRL1-ORF
Probe targets open reading frame
UTR
Example: Hs-HTT-UTR-C3
Probe targets the untranslated region (non-protein-coding region) only
5UTR
Example: Hs-GNRHR-5UTR
Probe targets the 5' untranslated region only
3UTR
Example: Rn-Npy1r-3UTR
Probe targets the 3' untranslated region only
Pan
Example: Pool
A mixture of multiple probe sets targeting multiple genes or transcripts

Enabling research, drug development (CDx) and diagnostics

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