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Probes for INS

ACD can configure probes for the various manual and automated assays for INS for RNAscope Assay, or for Basescope Assay compatible for your species of interest.

  • Probes for INS (48)
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  • Publications (151) Apply Publications filter
Does human endometrial LGR5 gene expression suggest the existence of another hormonally regulated epithelial stem cell niche?

Hum Reprod.

2018 Apr 10

Tempest N, Baker AM, Wright NA, Hapangama DK.
PMID: 29648645 | DOI: 10.1093/humrep/dey083

Abstract

STUDY QUESTION:

Is human endometrial leucine-rich repeat-containing G-protein-coupled receptor 5 (LGR5) gene expression limited to the postulated epithelial stem cell niche, stratum basalis glands, and is it hormonally regulated?

SUMMARY ANSWER:

LGR5 expressing cells are not limited to the postulated stem cell niche but LGR5 expression is hormonally regulated.

WHAT IS KNOWN ALREADY:

The human endometrium is a highly regenerative tissue; however, endometrial epithelial stem cell markers are yet to be confirmed. LGR5 is a marker of stem cells in various epithelia.

STUDY DESIGN, SIZE, DURATION:

The study was conducted at a University Research Institute. Endometrial samples from 50 healthy women undergoing benign gynaecological surgery with no endometrial pathology at the Liverpool Women's hospital were included and analysed in the following six sub-categories; proliferative, secretory phases of menstrual cycle, postmenopausal, those using oral and local progestagens and samples for in vitro explant culture.

PARTICIPANTS/MATERIALS, SETTING, METHODS:

In this study, we used the gold standard method, in situ hybridisation (ISH) along with qPCR and a systems biology approach to study the location of LGR5 gene expression in full thickness human endometrium and Fallopian tubes. The progesterone regulation of endometrial LGR5 was examined in vivo and in short-term cultured endometrial tissue explants in vitro. LGR5 expression was correlated with epithelial proliferation (Ki67), and expression of previously reported epithelia progenitor markers (SOX9 and SSEA-1) immunohistochemistry (IHC).

MAIN RESULTS AND THE ROLE OF CHANCE:

LGR5 gene expression was significantly higher in the endometrial luminal epithelium than in all other epithelial compartments in the healthy human endometrium, including the endometrial stratum basalis (P < 0.05). The strongest SSEA-1 and SOX9 staining was observed in the stratum basalis glands, but the general trend of SOX9 and SSEA-1 expression followed the same cyclical pattern of expression as LGR5. Stratum functionalis epithelial Ki67-LI and LGR5 expression levels correlated significantly (r = 0.74, P = 0.01), however, they did not correlate in luminal and stratum basalis epithelium (r = 0.5 and 0.13, respectively). Endometrial LGR5 demonstrates a dynamic spatiotemporal expression pattern, suggesting hormonal regulation. Oral and local progestogens significantly reduced endometrial LGR5 mRNA levels compared with women not on hormonal treatment (P < 0.01). Our data were in agreement with in silico analysis of published endometrial microarrays.

LARGE SCALE DATA:

We did not generate our own large scale data but interrogated publically available large scale data sets.

LIMITATIONS, REASONS FOR CAUTION:

In the absence of reliable antibodies for human LGR5 protein and validated lineage markers for the various epithelial populations that potentially exist within the endometrium, our study does not formally characterise or examine the functional ability of the resident LGR5+ cells as multipotent.

WIDER IMPLICATIONS OF THE FINDINGS:

These data will facilitate future lineage tracing studies in the human endometrial epithelium; to identify the location of stem cells and further complement the in vitro functional studies, to confirm if the LGR5 expressing epithelial cells indeed represent the epithelial stem cell population.

Suppression of intestinal tumorigenesis in Apc mutant mice by Musashi-1 deletion.

J Cell Sci.

2017 Jan 12

Wolfe AR, Ernlund A, McGuinness W, Lehmann C, Carl K, Balmaceda N, Neufeld KL.
PMID: 28082422 | DOI: 10.1242/jcs.197574

Therapeutic strategies based on a specific oncogenic target are better justified when elimination of that particular oncogene reduces tumorigenesis in a model organism. One such oncogene, Musashi 1 (Msi-1), regulates translation of target mRNAs and is implicated in promoting tumorigenesis in colon and other tissues. Msi-1 targets include the tumor suppressor Adenomatous Polyposis Coli (Apc), a Wnt pathway antagonist lost in ∼80% of all colorectal cancers. Cell culture experiments have established that Msi-1 is a Wnt target, thus positioning Msi-1 and Apc as mutual antagonists in a double negative feedback loop. Here, we report that intestines from mice lacking Msi-1 display aberrant Apc/Msi-1 double negative feedback, reduced Wnt and Notch signaling, decreased proliferation, and changes in stem cell populations, features predicted to suppress tumorigenesis. Indeed, ApcMin and Apc1322T mice have a dramatic reduction in intestinal polyp number when Msi-1 is deleted. Together, these results provide genetic evidence that Msi-1 contributes to intestinal tumorigenesis driven by Apc loss, and validate the pursuit of Msi-1 inhibitors as chemo-prevention agents to reduce tumor burden.

Stem cell functionality is microenvironmentally defined during tumour expansion and therapy response in colon cancer.

Nat Cell Biol.

2018 Sep 03

Lenos KJ, Miedema DM, Lodestijn SC, Nijman LE, van den Bosch T, Romero Ros X, Lourenço FC, Lecca MC, van der Heijden M, van Neerven SM, van Oort A, Leveille N, Adam RS, de Sousa E Melo F, Otten J, Veerman P, Hypolite G, Koens L, Lyons SK, Stassi G, Winton
PMID: 30177776 | DOI: 10.1038/s41556-018-0179-z

Solid malignancies have been speculated to depend on cancer stem cells (CSCs) for expansion and relapse after therapy. Here we report on quantitative analyses of lineage tracing data from primary colon cancer xenograft tissue to assess CSC functionality in a human solid malignancy. The temporally obtained clone size distribution data support a model in which stem cell function in established cancers is not intrinsically, but is entirely spatiotemporally orchestrated. Functional stem cells that drive tumour expansion predominantly reside at the tumour edge, close to cancer-associated fibroblasts. Hence, stem cell properties change in time depending on the cell location. Furthermore, although chemotherapy enriches for cells with a CSC phenotype, in this context functional stem cell properties are also fully defined by the microenvironment. To conclude, we identified osteopontin as a key cancer-associated fibroblast-produced factor that drives in situ clonogenicity in colon cancer.

Correlation of clinicopathological features and LGR5 expression in colon adenocarcinoma.

Annals of Diagnostic Pathology

2019 May 03

Sato K, Uehara T, Iwaya M, Nakajima T, Miyagawa Y, Suga T, Ota H, Tanaka E.
PMID: - | DOI: 10.1016/j.anndiagpath.2019.05.002

Colon cancer stem cells (CSCs) are closely related to tumorigenesis and treatment response, and LGR5 is currently the most robust and reliable CSC marker in colorectal cancer (CRC). However, LGR5 expression in CRC tumor budding (TB) is not well understood. We examined the clinicopathological and prognostic significance of LGR5 in CRC TB. LGR5 expression was evaluated by RNAscope, a newly developed RNA in situ hybridization technique, using a tissue microarray consisting of 55 patient samples of TB in colon adenocarcinoma (CA) selected from the medical archives at our hospital. Patients were stratified into negative and positive LGR5 expression groups. Inflammatory cell infiltration was weaker and histological grade was lower in the LGR5-positive group compared with the LGR5-negative group (P = 0.0407 and P = 0.0436, respectively). There was a significant difference in OS between the LGR5-positive group and LGR5-negative group (log-rank test, P = 0.0088). Cox proportional hazards models revealed that the LGR5-positive group (Overall survival (OS) = 0.37, 95% CI: 0.17–0.79, P = 0.0101) had better OS. LGR5 expression may be affected by inflammatory cell infiltration in the budding area of CA and is an important potential marker of prognosis.

Translation initiation factor eIF2Bε promotes Wnt-mediated clonogenicity and global translation in intestinal epithelial cells

Stem cell research

2021 Aug 11

Smit, WL;de Boer, RJ;Meijer, BJ;Spaan, CN;van Roest, M;Koelink, PJ;Koster, J;Dekker, E;Abbink, TEM;van der Knaap, MS;van den Brink, GR;Muncan, V;Heijmans, J;
PMID: 34399164 | DOI: 10.1016/j.scr.2021.102499

Modulation of global mRNA translation, which is essential for intestinal stem cell function, is controlled by Wnt signaling. Loss of tumor supressor APC in stem cells drives adenoma formation through hyperactivion of Wnt signaling and dysregulated translational control. It is unclear whether factors that coordinate global translation in the intestinal epithelium are needed for APC-driven malignant transformation. Here we identified nucleotide exchange factor eIF2Bε as a translation initiation factor involved in Wnt-mediated intestinal epithelial stemness. Using eIF2BεArg191His mice with a homozygous point mutation that leads to dysfunction in the enzymatic activity, we demonstrate that eIF2Bε is involved in small intestinal crypt formation, stemness marker expression, and secreted Paneth cell-derived granule formation. Wnt hyperactivation in ex vivo eIF2BεArg191His organoids, using a GSK3β inhibitor to mimic Apc driven transformation, shows that eIF2Bε is essential for Wnt-mediated clonogenicity and associated increase of the global translational capacity. Finally, we observe high eIF2Bε expression in human colonic adenoma tissues, exposing eIF2Bε as a potential target of CRC stem cells with aberrant Wnt signaling.
ITEM
RNAscope™ 2.5 LS Probe- Hs-PACSIN3-O1-C2 ?
Cat No. 1095798-C2

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    Specifications

    Gene :PACSIN3
    Species* :Human
    Species (common):Human
    Entrez Gene ID :29763
    Gene Alias :SDPIII
    Accession No:NM_001184975.2
    Target Region [Base Pairs (bp)] :311 - 1567
    No. of Pairs :18
    Assay Compatibility :N/A
    Shipping Temp :2-8 C
    Storage Temp :2-8 C
    Shelf Life :24 months from the date of manufacturing
    * Please check expiration dates on the reagent package
    Probe description :RNAscope™ 2.5 LS Probe - Hs-PACSIN3-O1-C2 Homo sapiens protein kinase C and casein kinase substrate in neurons 3 (PACSIN3) transcript variant 1 mRNA
    Channel :2
    RNAscope™ Assay Platform :N/A
  • Assay Compatibility
    Human
  • Recommended Controls
  • Product Insert/Data Sheet
    No Related Documents...

Specifications

Gene :PACSIN3
Species* :Human
Species (common):Human
Entrez Gene ID :29763
Gene Alias :SDPIII
Accession No:NM_001184975.2
Target Region [Base Pairs (bp)] :311 - 1567
No. of Pairs :18
Assay Compatibility :N/A
Shipping Temp :2-8 C
Storage Temp :2-8 C
Shelf Life :24 months from the date of manufacturing
* Please check expiration dates on the reagent package
Probe description :RNAscope™ 2.5 LS Probe - Hs-PACSIN3-O1-C2 Homo sapiens protein kinase C and casein kinase substrate in neurons 3 (PACSIN3) transcript variant 1 mRNA
Channel :2
RNAscope™ Assay Platform :N/A
Human
No Related Documents...
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RNAscope™ HiPlex Probe- Hs-PACSIN3-O1-T2 ?
Cat No. 1095791-T2
Manual Assay RNAscope HiPlex

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  • View Details

    Specifications

    Gene :PACSIN3
    Species* :Human
    Species (common):Human
    Entrez Gene ID :29763
    Gene Alias :SDPIII
    Accession No:NM_001184975.2
    Target Region [Base Pairs (bp)] :311 - 1567
    No. of Pairs :18
    Assay Compatibility :N/A
    Shipping Temp :2-8 C
    Storage Temp :2-8 C
    Shelf Life :24 months from the date of manufacturing
    * Please check expiration dates on the reagent package
    Probe description :RNAscope™ HiPlex Probe - Hs-PACSIN3-O1-T2 Homo sapiens protein kinase C and casein kinase substrate in neurons 3 (PACSIN3) transcript variant 1 mRNA
    Channel :N/A
    RNAscope™ Assay Platform :Manual Assay RNAscope HiPlex
  • Assay Compatibility
    Human
  • Recommended Controls
  • Product Insert/Data Sheet
    No Related Documents...

Specifications

Gene :PACSIN3
Species* :Human
Species (common):Human
Entrez Gene ID :29763
Gene Alias :SDPIII
Accession No:NM_001184975.2
Target Region [Base Pairs (bp)] :311 - 1567
No. of Pairs :18
Assay Compatibility :N/A
Shipping Temp :2-8 C
Storage Temp :2-8 C
Shelf Life :24 months from the date of manufacturing
* Please check expiration dates on the reagent package
Probe description :RNAscope™ HiPlex Probe - Hs-PACSIN3-O1-T2 Homo sapiens protein kinase C and casein kinase substrate in neurons 3 (PACSIN3) transcript variant 1 mRNA
Channel :N/A
RNAscope™ Assay Platform :Manual Assay RNAscope HiPlex
Human
No Related Documents...
ITEM
RNAscope™ HiPlex Probe- Hs-PACSIN3-O1-T3 ?
Cat No. 1095791-T3
Manual Assay RNAscope HiPlex

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  • View Details

    Specifications

    Gene :PACSIN3
    Species* :Human
    Species (common):Human
    Entrez Gene ID :29763
    Gene Alias :SDPIII
    Accession No:NM_001184975.2
    Target Region [Base Pairs (bp)] :311 - 1567
    No. of Pairs :18
    Assay Compatibility :N/A
    Shipping Temp :2-8 C
    Storage Temp :2-8 C
    Shelf Life :24 months from the date of manufacturing
    * Please check expiration dates on the reagent package
    Probe description :RNAscope™ HiPlex Probe - Hs-PACSIN3-O1-T3 Homo sapiens protein kinase C and casein kinase substrate in neurons 3 (PACSIN3) transcript variant 1 mRNA
    Channel :N/A
    RNAscope™ Assay Platform :Manual Assay RNAscope HiPlex
  • Assay Compatibility
    Human
  • Recommended Controls
  • Product Insert/Data Sheet
    No Related Documents...

Specifications

Gene :PACSIN3
Species* :Human
Species (common):Human
Entrez Gene ID :29763
Gene Alias :SDPIII
Accession No:NM_001184975.2
Target Region [Base Pairs (bp)] :311 - 1567
No. of Pairs :18
Assay Compatibility :N/A
Shipping Temp :2-8 C
Storage Temp :2-8 C
Shelf Life :24 months from the date of manufacturing
* Please check expiration dates on the reagent package
Probe description :RNAscope™ HiPlex Probe - Hs-PACSIN3-O1-T3 Homo sapiens protein kinase C and casein kinase substrate in neurons 3 (PACSIN3) transcript variant 1 mRNA
Channel :N/A
RNAscope™ Assay Platform :Manual Assay RNAscope HiPlex
Human
No Related Documents...
ITEM
RNAscope™ HiPlex Probe- Hs-PACSIN3-O1-T4 ?
Cat No. 1095791-T4
Manual Assay RNAscope HiPlex

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  • View Details

    Specifications

    Gene :PACSIN3
    Species* :Human
    Species (common):Human
    Entrez Gene ID :29763
    Gene Alias :SDPIII
    Accession No:NM_001184975.2
    Target Region [Base Pairs (bp)] :311 - 1567
    No. of Pairs :18
    Assay Compatibility :N/A
    Shipping Temp :2-8 C
    Storage Temp :2-8 C
    Shelf Life :24 months from the date of manufacturing
    * Please check expiration dates on the reagent package
    Probe description :RNAscope™ HiPlex Probe - Hs-PACSIN3-O1-T4 Homo sapiens protein kinase C and casein kinase substrate in neurons 3 (PACSIN3) transcript variant 1 mRNA
    Channel :N/A
    RNAscope™ Assay Platform :Manual Assay RNAscope HiPlex
  • Assay Compatibility
    Human
  • Recommended Controls
  • Product Insert/Data Sheet
    No Related Documents...

Specifications

Gene :PACSIN3
Species* :Human
Species (common):Human
Entrez Gene ID :29763
Gene Alias :SDPIII
Accession No:NM_001184975.2
Target Region [Base Pairs (bp)] :311 - 1567
No. of Pairs :18
Assay Compatibility :N/A
Shipping Temp :2-8 C
Storage Temp :2-8 C
Shelf Life :24 months from the date of manufacturing
* Please check expiration dates on the reagent package
Probe description :RNAscope™ HiPlex Probe - Hs-PACSIN3-O1-T4 Homo sapiens protein kinase C and casein kinase substrate in neurons 3 (PACSIN3) transcript variant 1 mRNA
Channel :N/A
RNAscope™ Assay Platform :Manual Assay RNAscope HiPlex
Human
No Related Documents...
ITEM
RNAscope™ HiPlex Probe- Hs-PACSIN3-O1-T5 ?
Cat No. 1095791-T5
Manual Assay RNAscope HiPlex

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  • View Details

    Specifications

    Gene :PACSIN3
    Species* :Human
    Species (common):Human
    Entrez Gene ID :29763
    Gene Alias :SDPIII
    Accession No:NM_001184975.2
    Target Region [Base Pairs (bp)] :311 - 1567
    No. of Pairs :18
    Assay Compatibility :N/A
    Shipping Temp :2-8 C
    Storage Temp :2-8 C
    Shelf Life :24 months from the date of manufacturing
    * Please check expiration dates on the reagent package
    Probe description :RNAscope™ HiPlex Probe - Hs-PACSIN3-O1-T5 Homo sapiens protein kinase C and casein kinase substrate in neurons 3 (PACSIN3) transcript variant 1 mRNA
    Channel :N/A
    RNAscope™ Assay Platform :Manual Assay RNAscope HiPlex
  • Assay Compatibility
    Human
  • Recommended Controls
  • Product Insert/Data Sheet
    No Related Documents...

Specifications

Gene :PACSIN3
Species* :Human
Species (common):Human
Entrez Gene ID :29763
Gene Alias :SDPIII
Accession No:NM_001184975.2
Target Region [Base Pairs (bp)] :311 - 1567
No. of Pairs :18
Assay Compatibility :N/A
Shipping Temp :2-8 C
Storage Temp :2-8 C
Shelf Life :24 months from the date of manufacturing
* Please check expiration dates on the reagent package
Probe description :RNAscope™ HiPlex Probe - Hs-PACSIN3-O1-T5 Homo sapiens protein kinase C and casein kinase substrate in neurons 3 (PACSIN3) transcript variant 1 mRNA
Channel :N/A
RNAscope™ Assay Platform :Manual Assay RNAscope HiPlex
Human
No Related Documents...
ITEM
RNAscope™ HiPlex Probe- Hs-PACSIN3-O1-T6 ?
Cat No. 1095791-T6
Manual Assay RNAscope HiPlex

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Add to compare
Compare
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  • View Details

    Specifications

    Gene :PACSIN3
    Species* :Human
    Species (common):Human
    Entrez Gene ID :29763
    Gene Alias :SDPIII
    Accession No:NM_001184975.2
    Target Region [Base Pairs (bp)] :311 - 1567
    No. of Pairs :18
    Assay Compatibility :N/A
    Shipping Temp :2-8 C
    Storage Temp :2-8 C
    Shelf Life :24 months from the date of manufacturing
    * Please check expiration dates on the reagent package
    Probe description :RNAscope™ HiPlex Probe - Hs-PACSIN3-O1-T6 Homo sapiens protein kinase C and casein kinase substrate in neurons 3 (PACSIN3) transcript variant 1 mRNA
    Channel :N/A
    RNAscope™ Assay Platform :Manual Assay RNAscope HiPlex
  • Assay Compatibility
    Human
  • Recommended Controls
  • Product Insert/Data Sheet
    No Related Documents...

Specifications

Gene :PACSIN3
Species* :Human
Species (common):Human
Entrez Gene ID :29763
Gene Alias :SDPIII
Accession No:NM_001184975.2
Target Region [Base Pairs (bp)] :311 - 1567
No. of Pairs :18
Assay Compatibility :N/A
Shipping Temp :2-8 C
Storage Temp :2-8 C
Shelf Life :24 months from the date of manufacturing
* Please check expiration dates on the reagent package
Probe description :RNAscope™ HiPlex Probe - Hs-PACSIN3-O1-T6 Homo sapiens protein kinase C and casein kinase substrate in neurons 3 (PACSIN3) transcript variant 1 mRNA
Channel :N/A
RNAscope™ Assay Platform :Manual Assay RNAscope HiPlex
Human
No Related Documents...
ITEM
RNAscope™ HiPlex Probe- Hs-PACSIN3-O1-T7 ?
Cat No. 1095791-T7
Manual Assay RNAscope HiPlex

Log In to see price

Add to compare
Compare
Request a Quote
  • View Details

    Specifications

    Gene :PACSIN3
    Species* :Human
    Species (common):Human
    Entrez Gene ID :29763
    Gene Alias :SDPIII
    Accession No:NM_001184975.2
    Target Region [Base Pairs (bp)] :311 - 1567
    No. of Pairs :18
    Assay Compatibility :N/A
    Shipping Temp :2-8 C
    Storage Temp :2-8 C
    Shelf Life :24 months from the date of manufacturing
    * Please check expiration dates on the reagent package
    Probe description :RNAscope™ HiPlex Probe - Hs-PACSIN3-O1-T7 Homo sapiens protein kinase C and casein kinase substrate in neurons 3 (PACSIN3) transcript variant 1 mRNA
    Channel :N/A
    RNAscope™ Assay Platform :Manual Assay RNAscope HiPlex
  • Assay Compatibility
    Human
  • Recommended Controls
  • Product Insert/Data Sheet
    No Related Documents...

Specifications

Gene :PACSIN3
Species* :Human
Species (common):Human
Entrez Gene ID :29763
Gene Alias :SDPIII
Accession No:NM_001184975.2
Target Region [Base Pairs (bp)] :311 - 1567
No. of Pairs :18
Assay Compatibility :N/A
Shipping Temp :2-8 C
Storage Temp :2-8 C
Shelf Life :24 months from the date of manufacturing
* Please check expiration dates on the reagent package
Probe description :RNAscope™ HiPlex Probe - Hs-PACSIN3-O1-T7 Homo sapiens protein kinase C and casein kinase substrate in neurons 3 (PACSIN3) transcript variant 1 mRNA
Channel :N/A
RNAscope™ Assay Platform :Manual Assay RNAscope HiPlex
Human
No Related Documents...

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Description
sense
Example: Hs-LAG3-sense
Standard probes for RNA detection are in antisense. Sense probe is reverse complent to the corresponding antisense probe.
Intron#
Example: Mm-Htt-intron2
Probe targets the indicated intron in the target gene, commonly used for pre-mRNA detection
Pool/Pan
Example: Hs-CD3-pool (Hs-CD3D, Hs-CD3E, Hs-CD3G)
A mixture of multiple probe sets targeting multiple genes or transcripts
No-XSp
Example: Hs-PDGFB-No-XMm
Does not cross detect with the species (Sp)
XSp
Example: Rn-Pde9a-XMm
designed to cross detect with the species (Sp)
O#
Example: Mm-Islr-O1
Alternative design targeting different regions of the same transcript or isoforms
CDS
Example: Hs-SLC31A-CDS
Probe targets the protein-coding sequence only
EnEmProbe targets exons n and m
En-EmProbe targets region from exon n to exon m
Retired Nomenclature
tvn
Example: Hs-LEPR-tv1
Designed to target transcript variant n
ORF
Example: Hs-ACVRL1-ORF
Probe targets open reading frame
UTR
Example: Hs-HTT-UTR-C3
Probe targets the untranslated region (non-protein-coding region) only
5UTR
Example: Hs-GNRHR-5UTR
Probe targets the 5' untranslated region only
3UTR
Example: Rn-Npy1r-3UTR
Probe targets the 3' untranslated region only
Pan
Example: Pool
A mixture of multiple probe sets targeting multiple genes or transcripts

Enabling research, drug development (CDx) and diagnostics

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