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Probes for INS

ACD can configure probes for the various manual and automated assays for INS for RNAscope Assay, or for Basescope Assay compatible for your species of interest.

  • Probes for INS (62)
  • Kits & Accessories (0)
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  • Publications (51)
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Astrocyte-neuron crosstalk through Hedgehog signaling mediates cortical synapse development

Cell reports

2022 Feb 22

Xie, Y;Kuan, AT;Wang, W;Herbert, ZT;Mosto, O;Olukoya, O;Adam, M;Vu, S;Kim, M;Tran, D;Gómez, N;Charpentier, C;Sorour, I;Lacey, TE;Tolstorukov, MY;Sabatini, BL;Lee, WA;Harwell, CC;
PMID: 35196485 | DOI: 10.1016/j.celrep.2022.110416

Neuron-glia interactions play a critical role in the regulation of synapse formation and circuit assembly. Here we demonstrate that canonical Sonic hedgehog (Shh) pathway signaling in cortical astrocytes acts to coordinate layer-specific synaptic connectivity. We show that the Shh receptor Ptch1 is expressed by cortical astrocytes during development and that Shh signaling is necessary and sufficient to promote the expression of genes involved in regulating synaptic development and layer-enriched astrocyte molecular identity. Loss of Shh in layer V neurons reduces astrocyte complexity and coverage by astrocytic processes in tripartite synapses; conversely, cell-autonomous activation of Shh signaling in astrocytes promotes cortical excitatory synapse formation. Furthermore, Shh-dependent genes Lrig1 and Sparc distinctively contribute to astrocyte morphology and synapse formation. Together, these results suggest that Shh secreted from deep-layer cortical neurons acts to specialize the molecular and functional features of astrocytes during development to shape circuit assembly and function.
Ciliary IFT88 protects coordinated adolescent growth plate ossification from disruptive physiological mechanical forces

Journal of bone and mineral research : the official journal of the American Society for Bone and Mineral Research

2022 Jan 17

Coveney, CR;Samvelyan, HJ;Miotla-Zarebska, J;Carnegie, J;Chang, E;Corrin, CJ;Coveney, T;Stott, B;Parisi, I;Duarte, C;Vincent, TL;Staines, KA;Wann, AKT;
PMID: 35038201 | DOI: 10.1002/jbmr.4502

In comparison to our understanding of endochondral ossification, much less is known about the coordinated arrest of growth defined by the narrowing and fusion of the cartilaginous growth plate. Throughout the musculoskeletal system, appropriate cell and tissue responses to mechanical force delineate morphogenesis and ensure lifelong health. It remains unclear how mechanical cues are integrated into many biological programmes including those coordinating the ossification of the adolescent growth plate at the cessation of growth. Primary cilia are microtubule-based organelles tuning a range of cell activities, including signalling cascades activated or modulated by extracellular biophysical cues. Cilia have been proposed to directly facilitate cell mechanotransduction. To explore the influence of primary cilia in the mouse adolescent limb, we conditionally targeted the ciliary gene Intraflagellar transport protein 88 (Ift88fl/fl ) in the juvenile and adolescent skeleton using a cartilage-specific, inducible, Cre (AggrecanCreERT2 Ift88fl/fl ). Deletion of IFT88 in cartilage, which reduced ciliation in the growth plate, disrupted chondrocyte differentiation, cartilage resorption and mineralisation. These effects were largely restricted to peripheral tibial regions beneath the load-bearing compartments of the knee. These regions were typified by an enlarged population of hypertrophic chondrocytes. While normal patterns of hedgehog signalling were maintained, targeting IFT88 inhibited hypertrophic chondrocyte VEGF expression and downstream vascular recruitment, osteoclastic activity and the replacement of cartilage with bone. In control mice, increases to physiological loading also impair ossification in the peripheral growth plate, mimicking the effects of IFT88 deletion. Limb immobilisation inhibited changes to VEGF expression and epiphyseal morphology in Ift88cKO mice, indicating the effects of depletion of IFT88 in the adolescent growth plate are mechano-dependent. We propose that during this pivotal phase in adolescent skeletal maturation, ciliary IFT88 protects uniform, coordinated ossification of the growth plate from an otherwise disruptive heterogeneity of physiological mechanical forces. This article is protected by
Utility of GLI1 RNA chromogenic in situ hybridization in distinguishing basal cell carcinoma from histopathologic mimics

Modern pathology : an official journal of the United States and Canadian Academy of Pathology, Inc

2023 Jun 28

Menge, TD;Durgin, JS;Hrycaj, SM;Brent, AA;Patel, RM;Harms, PW;Fullen, DR;Chan, MP;Bresler, SC;
PMID: 37391171 | DOI: 10.1016/j.modpat.2023.100265

Basal cell carcinoma (BCC) is the most common human malignancy and is a leading cause of non-melanoma skin cancer-related morbidity. BCC has several histologic mimics which may have treatment and prognostic implications. Furthermore, BCC may show alternative differentiation toward a variety of cutaneous structures. The vast majority of BCCs harbor mutations in the hedgehog signaling pathway, resulting in increased expression of the GLI family of transcription factors. GLI1 immunohistochemistry has been shown to discriminate between several tumor types but demonstrates high background signal and lack of specificity. In this study we evaluate the utility of GLI1 RNA chromogenic in situ hybridization (CISH) as a novel method of distinguishing between BCC and other epithelial neoplasms. Expression of GLI1 by RNA CISH was retrospectively evaluated in a total of 220 cases including 60 BCCs, 37 squamous cell carcinomas (SCCs) including conventional, basaloid, and HPV-associated tumors, 16 sebaceous neoplasms, 10 Merkel cell carcinomas (MCCs), 58 benign follicular tumors, and 39 ductal tumors. The threshold for positivity was determined to be greater than or equal to 3 GLI1 signals in at least 50% of tumor cells. Positive GLI1 expression was identified in 57/60 BCCs including metastatic BCC, collision lesions with SCC, and BCCs with squamous, ductal, or clear cell differentiation or with other unusual features, as compared to 1/37 SCCs, 0/11 sebaceous carcinomas, 0/5 sebaceomas, 1/10 MCCs, 0/39 ductal tumors, and 28/58 follicular tumors. With careful evaluation, GLI1 RNA CISH is highly sensitive (95%) and specific (98%) in distinguishing between BCC and non-follicular epithelial neoplasms. However, GLI1 CISH is not specific for distinguishing BCC from most benign follicular tumors. Overall, detection of GLI1RNA by CISH may be a useful tool for precise classification of histologically challenging basaloid tumors, particularly in the setting of small biopsy specimens, metaplastic differentiation, or metastatic disease.
ITEM
RNAscope™ 2.5 LS Probe- V-Langat ?
Cat No. 415638
Automated Assay for Leica Systems - RNAscope

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  • View Details

    Specifications

    Gene :Langat
    Species* :Langat virus
    Species (common):Langat virus
    Entrez Gene ID :N/A
    Gene Alias :N/A
    Accession No :N/A
    Target Region [Base Pairs (bp)] :1058 - 2427
    No. of Pairs :30
    Assay Compatibility :N/A
    Shipping Temp :2-8 C
    Storage Temp :2-8 C
    Shelf Life :24 months from the date of manufacturing
    * Please check expiration dates on the reagent package
    Probe description :virus in rodents (Langat)
    Channel :1
    RNAscope™ Assay Platform :Automated Assay for Leica Systems - RNAscope
  • Assay Compatibility
    Langat virus
  • Recommended Controls
  • Product Insert/Data Sheet
    No Related Documents...

Specifications

Gene :Langat
Species* :Langat virus
Species (common):Langat virus
Entrez Gene ID :N/A
Gene Alias :N/A
Accession No :N/A
Target Region [Base Pairs (bp)] :1058 - 2427
No. of Pairs :30
Assay Compatibility :N/A
Shipping Temp :2-8 C
Storage Temp :2-8 C
Shelf Life :24 months from the date of manufacturing
* Please check expiration dates on the reagent package
Probe description :virus in rodents (Langat)
Channel :1
RNAscope™ Assay Platform :Automated Assay for Leica Systems - RNAscope
Langat virus
No Related Documents...
ITEM
RNAscope™ 2.5 LS Probe- V-Langat-sense ?
Cat No. 451338
Automated Assay for Leica Systems - RNAscope

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  • View Details

    Specifications

    Gene :Langat
    Species* :Langat virus
    Species (common):Langat virus
    Entrez Gene ID :N/A
    Gene Alias :N/A
    Accession No :N/A
    Target Region [Base Pairs (bp)] :1058 - 2427
    No. of Pairs :30
    Assay Compatibility :N/A
    Shipping Temp :2-8 C
    Storage Temp :2-8 C
    Shelf Life :24 months from the date of manufacturing
    * Please check expiration dates on the reagent package
    Probe description :virus in rodents (Langat)
    Channel :1
    RNAscope™ Assay Platform :Automated Assay for Leica Systems - RNAscope
  • Assay Compatibility
    Langat virus
  • Recommended Controls
  • Product Insert/Data Sheet
    No Related Documents...

Specifications

Gene :Langat
Species* :Langat virus
Species (common):Langat virus
Entrez Gene ID :N/A
Gene Alias :N/A
Accession No :N/A
Target Region [Base Pairs (bp)] :1058 - 2427
No. of Pairs :30
Assay Compatibility :N/A
Shipping Temp :2-8 C
Storage Temp :2-8 C
Shelf Life :24 months from the date of manufacturing
* Please check expiration dates on the reagent package
Probe description :virus in rodents (Langat)
Channel :1
RNAscope™ Assay Platform :Automated Assay for Leica Systems - RNAscope
Langat virus
No Related Documents...
ITEM
RNAscope™ 2.5 VS Probe- V-Langat ?
Cat No. 415639
Automated Assay for Ventana Systems - RNAscope

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  • View Details

    Specifications

    Gene :Langat
    Species* :Langat virus
    Species (common):Langat virus
    Entrez Gene ID :N/A
    Gene Alias :N/A
    Accession No :N/A
    Target Region [Base Pairs (bp)] :1058 - 2427
    No. of Pairs :30
    Assay Compatibility :N/A
    Shipping Temp :2-8 C
    Storage Temp :2-8 C
    Shelf Life :24 months from the date of manufacturing
    * Please check expiration dates on the reagent package
    Probe description :virus in rodents (Langat)
    Channel :1
    RNAscope™ Assay Platform :Automated Assay for Ventana Systems - RNAscope
  • Assay Compatibility
    Langat virus
  • Recommended Controls
  • Product Insert/Data Sheet
    No Related Documents...

Specifications

Gene :Langat
Species* :Langat virus
Species (common):Langat virus
Entrez Gene ID :N/A
Gene Alias :N/A
Accession No :N/A
Target Region [Base Pairs (bp)] :1058 - 2427
No. of Pairs :30
Assay Compatibility :N/A
Shipping Temp :2-8 C
Storage Temp :2-8 C
Shelf Life :24 months from the date of manufacturing
* Please check expiration dates on the reagent package
Probe description :virus in rodents (Langat)
Channel :1
RNAscope™ Assay Platform :Automated Assay for Ventana Systems - RNAscope
Langat virus
No Related Documents...
ITEM
RNAscope™ 2.5 VS Probe- V-Langat-sense ?
Cat No. 451339
Automated Assay for Ventana Systems - RNAscope

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  • View Details

    Specifications

    Gene :Langat
    Species* :Langat virus
    Species (common):Langat virus
    Entrez Gene ID :N/A
    Gene Alias :N/A
    Accession No :N/A
    Target Region [Base Pairs (bp)] :1058 - 2427
    No. of Pairs :30
    Assay Compatibility :N/A
    Shipping Temp :2-8 C
    Storage Temp :2-8 C
    Shelf Life :24 months from the date of manufacturing
    * Please check expiration dates on the reagent package
    Probe description :virus in rodents (Langat)
    Channel :1
    RNAscope™ Assay Platform :Automated Assay for Ventana Systems - RNAscope
  • Assay Compatibility
    Langat virus
  • Recommended Controls
  • Product Insert/Data Sheet
    No Related Documents...

Specifications

Gene :Langat
Species* :Langat virus
Species (common):Langat virus
Entrez Gene ID :N/A
Gene Alias :N/A
Accession No :N/A
Target Region [Base Pairs (bp)] :1058 - 2427
No. of Pairs :30
Assay Compatibility :N/A
Shipping Temp :2-8 C
Storage Temp :2-8 C
Shelf Life :24 months from the date of manufacturing
* Please check expiration dates on the reagent package
Probe description :virus in rodents (Langat)
Channel :1
RNAscope™ Assay Platform :Automated Assay for Ventana Systems - RNAscope
Langat virus
No Related Documents...
ITEM
RNAscope™ Probe- V-Langat-sense-C3 ?
Cat No. 451331-C3
Manual Assay RNAscope

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  • View Details

    Specifications

    Gene :Langat
    Species* :Langat virus
    Species (common):Langat virus
    Entrez Gene ID :N/A
    Gene Alias :N/A
    Accession No :N/A
    Target Region [Base Pairs (bp)] :1058 - 2427
    No. of Pairs :30
    Assay Compatibility :RNAscope™ Multiplex Fluorescent Assay
    Shipping Temp :2-8 C
    Storage Temp :2-8 C
    Shelf Life :24 months from the date of manufacturing
    * Please check expiration dates on the reagent package
    Probe description :RNAscope™ Probe - V-Langat-sense-C3 - virus in rodents (Langat)
    Channel :3
    RNAscope™ Assay Platform :Manual Assay RNAscope
  • Assay Compatibility
    RNAscope™ Multiplex Fluorescent Assay
  • Recommended Controls
  • Product Insert/Data Sheet
    No Related Documents...

Specifications

Gene :Langat
Species* :Langat virus
Species (common):Langat virus
Entrez Gene ID :N/A
Gene Alias :N/A
Accession No :N/A
Target Region [Base Pairs (bp)] :1058 - 2427
No. of Pairs :30
Assay Compatibility :RNAscope™ Multiplex Fluorescent Assay
Shipping Temp :2-8 C
Storage Temp :2-8 C
Shelf Life :24 months from the date of manufacturing
* Please check expiration dates on the reagent package
Probe description :RNAscope™ Probe - V-Langat-sense-C3 - virus in rodents (Langat)
Channel :3
RNAscope™ Assay Platform :Manual Assay RNAscope
RNAscope™ Multiplex Fluorescent Assay
No Related Documents...
ITEM
RNAscope™ HiPlex Probe- V-Langat-T1 ?
Cat No. 415631-T1
Manual Assay RNAscope HiPlex

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  • View Details

    Specifications

    Gene :Langat
    Species* :Langat virus
    Species (common):Langat virus
    Entrez Gene ID :N/A
    Gene Alias :N/A
    Accession No :N/A
    Target Region [Base Pairs (bp)] :1058 - 2427
    No. of Pairs :30
    Assay Compatibility :N/A
    Shipping Temp :2-8 C
    Storage Temp :2-8 C
    Shelf Life :24 months from the date of manufacturing
    * Please check expiration dates on the reagent package
    Probe description :RNAscope™ HiPlex Probe - V-Langat-T1 - virus in rodents (Langat)
    Channel :N/A
    RNAscope™ Assay Platform :Manual Assay RNAscope HiPlex
  • Assay Compatibility
    Langat virus
  • Recommended Controls
  • Product Insert/Data Sheet
    No Related Documents...

Specifications

Gene :Langat
Species* :Langat virus
Species (common):Langat virus
Entrez Gene ID :N/A
Gene Alias :N/A
Accession No :N/A
Target Region [Base Pairs (bp)] :1058 - 2427
No. of Pairs :30
Assay Compatibility :N/A
Shipping Temp :2-8 C
Storage Temp :2-8 C
Shelf Life :24 months from the date of manufacturing
* Please check expiration dates on the reagent package
Probe description :RNAscope™ HiPlex Probe - V-Langat-T1 - virus in rodents (Langat)
Channel :N/A
RNAscope™ Assay Platform :Manual Assay RNAscope HiPlex
Langat virus
No Related Documents...
ITEM
RNAscope™ HiPlex Probe- V-Langat-T10 ?
Cat No. 415631-T10
Manual Assay RNAscope HiPlex

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  • View Details

    Specifications

    Gene :Langat
    Species* :Langat virus
    Species (common):Langat virus
    Entrez Gene ID :N/A
    Gene Alias :N/A
    Accession No :N/A
    Target Region [Base Pairs (bp)] :1058 - 2427
    No. of Pairs :30
    Assay Compatibility :N/A
    Shipping Temp :2-8 C
    Storage Temp :2-8 C
    Shelf Life :24 months from the date of manufacturing
    * Please check expiration dates on the reagent package
    Probe description :RNAscope™ HiPlex Probe - V-Langat-T10 - virus in rodents (Langat)
    Channel :N/A
    RNAscope™ Assay Platform :Manual Assay RNAscope HiPlex
  • Assay Compatibility
    Langat virus
  • Recommended Controls
  • Product Insert/Data Sheet
    No Related Documents...

Specifications

Gene :Langat
Species* :Langat virus
Species (common):Langat virus
Entrez Gene ID :N/A
Gene Alias :N/A
Accession No :N/A
Target Region [Base Pairs (bp)] :1058 - 2427
No. of Pairs :30
Assay Compatibility :N/A
Shipping Temp :2-8 C
Storage Temp :2-8 C
Shelf Life :24 months from the date of manufacturing
* Please check expiration dates on the reagent package
Probe description :RNAscope™ HiPlex Probe - V-Langat-T10 - virus in rodents (Langat)
Channel :N/A
RNAscope™ Assay Platform :Manual Assay RNAscope HiPlex
Langat virus
No Related Documents...
ITEM
RNAscope™ HiPlex Probe- V-Langat-T11 ?
Cat No. 415631-T11
Manual Assay RNAscope HiPlex

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Add to compare
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  • View Details

    Specifications

    Gene :Langat
    Species* :Langat virus
    Species (common):Langat virus
    Entrez Gene ID :N/A
    Gene Alias :N/A
    Accession No :N/A
    Target Region [Base Pairs (bp)] :1058 - 2427
    No. of Pairs :30
    Assay Compatibility :N/A
    Shipping Temp :2-8 C
    Storage Temp :2-8 C
    Shelf Life :24 months from the date of manufacturing
    * Please check expiration dates on the reagent package
    Probe description :RNAscope™ HiPlex Probe - V-Langat-T11 - virus in rodents (Langat)
    Channel :N/A
    RNAscope™ Assay Platform :Manual Assay RNAscope HiPlex
  • Assay Compatibility
    Langat virus
  • Recommended Controls
  • Product Insert/Data Sheet
    No Related Documents...

Specifications

Gene :Langat
Species* :Langat virus
Species (common):Langat virus
Entrez Gene ID :N/A
Gene Alias :N/A
Accession No :N/A
Target Region [Base Pairs (bp)] :1058 - 2427
No. of Pairs :30
Assay Compatibility :N/A
Shipping Temp :2-8 C
Storage Temp :2-8 C
Shelf Life :24 months from the date of manufacturing
* Please check expiration dates on the reagent package
Probe description :RNAscope™ HiPlex Probe - V-Langat-T11 - virus in rodents (Langat)
Channel :N/A
RNAscope™ Assay Platform :Manual Assay RNAscope HiPlex
Langat virus
No Related Documents...
ITEM
RNAscope™ HiPlex Probe- V-Langat-T12 ?
Cat No. 415631-T12
Manual Assay RNAscope HiPlex

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Add to compare
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  • View Details

    Specifications

    Gene :Langat
    Species* :Langat virus
    Species (common):Langat virus
    Entrez Gene ID :N/A
    Gene Alias :N/A
    Accession No :N/A
    Target Region [Base Pairs (bp)] :1058 - 2427
    No. of Pairs :30
    Assay Compatibility :N/A
    Shipping Temp :2-8 C
    Storage Temp :2-8 C
    Shelf Life :24 months from the date of manufacturing
    * Please check expiration dates on the reagent package
    Probe description :RNAscope™ HiPlex Probe - V-Langat-T12 - virus in rodents (Langat)
    Channel :N/A
    RNAscope™ Assay Platform :Manual Assay RNAscope HiPlex
  • Assay Compatibility
    Langat virus
  • Recommended Controls
  • Product Insert/Data Sheet
    No Related Documents...

Specifications

Gene :Langat
Species* :Langat virus
Species (common):Langat virus
Entrez Gene ID :N/A
Gene Alias :N/A
Accession No :N/A
Target Region [Base Pairs (bp)] :1058 - 2427
No. of Pairs :30
Assay Compatibility :N/A
Shipping Temp :2-8 C
Storage Temp :2-8 C
Shelf Life :24 months from the date of manufacturing
* Please check expiration dates on the reagent package
Probe description :RNAscope™ HiPlex Probe - V-Langat-T12 - virus in rodents (Langat)
Channel :N/A
RNAscope™ Assay Platform :Manual Assay RNAscope HiPlex
Langat virus
No Related Documents...

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Description
sense
Example: Hs-LAG3-sense
Standard probes for RNA detection are in antisense. Sense probe is reverse complent to the corresponding antisense probe.
Intron#
Example: Mm-Htt-intron2
Probe targets the indicated intron in the target gene, commonly used for pre-mRNA detection
Pool/Pan
Example: Hs-CD3-pool (Hs-CD3D, Hs-CD3E, Hs-CD3G)
A mixture of multiple probe sets targeting multiple genes or transcripts
No-XSp
Example: Hs-PDGFB-No-XMm
Does not cross detect with the species (Sp)
XSp
Example: Rn-Pde9a-XMm
designed to cross detect with the species (Sp)
O#
Example: Mm-Islr-O1
Alternative design targeting different regions of the same transcript or isoforms
CDS
Example: Hs-SLC31A-CDS
Probe targets the protein-coding sequence only
EnEmProbe targets exons n and m
En-EmProbe targets region from exon n to exon m
Retired Nomenclature
tvn
Example: Hs-LEPR-tv1
Designed to target transcript variant n
ORF
Example: Hs-ACVRL1-ORF
Probe targets open reading frame
UTR
Example: Hs-HTT-UTR-C3
Probe targets the untranslated region (non-protein-coding region) only
5UTR
Example: Hs-GNRHR-5UTR
Probe targets the 5' untranslated region only
3UTR
Example: Rn-Npy1r-3UTR
Probe targets the 3' untranslated region only
Pan
Example: Pool
A mixture of multiple probe sets targeting multiple genes or transcripts

Enabling research, drug development (CDx) and diagnostics

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