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Probes for INS

ACD can configure probes for the various manual and automated assays for INS for RNAscope Assay, or for Basescope Assay compatible for your species of interest.

  • Probes for INS (108)
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Edinger-Westphal peptidergic neurons enable maternal preparatory nesting

Neuron

2022 Feb 01

Topilko, T;Diaz, SL;Pacheco, CM;Verny, F;Rousseau, CV;Kirst, C;Deleuze, C;Gaspar, P;Renier, N;
PMID: 35123655 | DOI: 10.1016/j.neuron.2022.01.012

Optimizing reproductive fitness in mammalians requires behavioral adaptations during pregnancy. Maternal preparatory nesting is an essential behavior for the survival of the upcoming litter. Brain-wide immediate early gene mapping in mice evoked by nesting sequences revealed that phases of nest construction strongly activate peptidergic neurons of the Edinger-Westphal nucleus in pregnant mice. Genetic ablation, bidirectional neuromodulation, and in vitro and in vivo activity recordings demonstrated that these neurons are essential to modulate arousal before sleep to promote nesting specifically. We show that these neurons enable the behavioral effects of progesterone on preparatory nesting by modulating a broad network of downstream targets. Our study deciphers the role of midbrain CART+ neurons in behavioral adaptations during pregnancy vital for reproductive fitness.
In vitro patterning of pluripotent stem cell-derived intestine recapitulates in vivo human development.

Development.

2016 Dec 07

Tsai YH, Nattiv R, Dedhia PH, Nagy MS, Chin AM, Thomson M, Klein O, Spence J.
PMID: 27927684 | DOI: 10.1242/dev.138453

The intestine plays a central role in digestion, nutrient absorption and metabolism, with individual regions of the intestine having distinct functional roles. For example, the most proximal region of the small intestine, the duodenum, is associated with absorption of micronutrients such as iron and folate, whereas the more distal ileum is responsible for recycling bile salts. Many examples of region-specific gene expression in the adult intestine are known, but how intestinal regional identity is established during development is a largely open question. Here, we identified several genes that are expressed in a region-specific manner in the developing human intestine, and using human embryonic stem cell derived intestinal organoids, we demonstrate that the time of exposure to active FGF and WNT signaling controls regional identity. Exposure to short durations of FGF4 and CHIR99021 (a GSK3β inhibitor that stabilizes β-CATENIN) resulted in organoids with gene expression patterns similar to developing human duodenum, whereas long durations of exposure resulted in organoids similar to ileum. When region-specific organoids were transplanted into immunocompromised mice, duodenum-like organoids and ileum-like organoids retained their regional identity, demonstrating that regional identity of organoids is stable after initial patterning occurs. This work provides insights into the mechanisms that control regional specification of the developing human intestine and provides new tools for basic and translational research.

Enhancing neuronal chloride extrusion rescues?2/?3 GABAA-mediated analgesia in neuropathic pain

Nat Commun

2020 Feb 13

Lorenzo LE, Godin AG, Ferrini F, Bachand K, Plasencia-Fernandez I, Labrecque S, Girard A, Boudreau D, Kianicka I, Gagnon M, Doyon N, Ribeiro-da-Silva A, De Koninck Y
PMID: 32054836 | DOI: 10.1038/s41467-019-14154-6

Spinal disinhibition has been hypothesized to underlie pain hypersensitivity in neuropathic pain. Apparently contradictory mechanisms have been reported, raising questions on the best target to produce analgesia. Here, we show that nerve injury is associated with a reduction in the number of inhibitory synapses in the spinal dorsal horn. Paradoxically, this is accompanied by a BDNF-TrkB-mediated upregulation of synaptic GABAARs and by an ?1-to-?2GABAAR subunit switch, providing a mechanistic rationale for the analgesic action of the ?2,3GABAAR benzodiazepine-site ligand L838,417 after nerve injury. Yet, we demonstrate that impaired Cl- extrusion underlies the failure of L838,417 to induce analgesia at high doses due to a resulting collapse in Cl- gradient, dramatically limiting the benzodiazepine therapeutic window. In turn, enhancing KCC2 activity not only potentiated L838,417-induced analgesia, it rescued its analgesic potential at high doses, revealing a novel strategy for analgesia in pathological pain, by combined targeting of the appropriate GABAAR-subtypes and restoring Cl- homeostasis
Lateral septum as a melanocortin downstream site in obesity development

Cell reports

2023 May 11

Xu, Y;Jiang, Z;Li, H;Cai, J;Jiang, Y;Otiz-Guzman, J;Xu, Y;Arenkiel, BR;Tong, Q;
PMID: 37171957 | DOI: 10.1016/j.celrep.2023.112502

The melanocortin pathway is well established to be critical for body-weight regulation in both rodents and humans. Despite extensive studies focusing on this pathway, the downstream brain sites that mediate its action are not clear. Here, we found that, among the known paraventricular hypothalamic (PVH) neuron groups, those expressing melanocortin receptors 4 (PVHMc4R) preferably project to the ventral part of the lateral septum (LSv), a brain region known to be involved in emotional behaviors. Photostimulation of PVHMc4R neuron terminals in the LSv reduces feeding and causes aversion, whereas deletion of Mc4Rs or disruption of glutamate release from LSv-projecting PVH neurons causes obesity. In addition, disruption of AMPA receptor function in PVH-projected LSv neurons causes obesity. Importantly, chronic inhibition of PVH- or PVHMc4R-projected LSv neurons causes obesity associated with reduced energy expenditure. Thus, the LSv functions as an important node in mediating melanocortin action on body-weight regulation.
Examining ventral subiculum and basolateral amygdala projections to the nucleus accumbens shell: Differential expression of VGLuT1, VGLuT2 and VGaT in the rat

Neuroscience letters

2022 Aug 26

Jin, S;Maddern, XJ;Campbell, EJ;Lawrence, AJ;
PMID: 36038028 | DOI: 10.1016/j.neulet.2022.136858

Projections to the striatum are well-identified. For example, in the ventral striatum, two major inputs to the medial nucleus accumbens shell include the ventral subiculum and basolateral amygdala. However, the chemical phenotype(s) of these projection neurons remain unclear. In this study, we examined amygdalostriatal and corticostriatal connectivity in rats using injections of the retrograde tracer cholera toxin b into the nucleus accumbens shell. To determine the neurotransmitter identity of projection neurons, we combined retrograde tracing with RNAscope in-situ hybridization, using mRNA probes against vesicular transporters associated with glutamatergic (VGluT1 - Slc17a7, VGluT2 - Slc17a6) or GABAergic (VGaT - Slc32a1) neurotransmission. Confocal imaging was used to examine vesicular transporter mRNA expression in the ventral subiculum and basolateral amygdala inputs to the nucleus accumbens shell. Both projections contained mostly VGluT1-expressing neurons. Interestingly, almost a quarter of ventral subiculum to nucleus accumbens shell projections co-expressed VGluT1 and VGluT2 compared to a relatively small number (∼3%) that were co-expressed in basolateral amygdala to nucleus accumbens shell afferents. However, almost a quarter of basolateral amygdala to nucleus accumbens shell projections were VGaT-positive. These findings highlight the diverse proportions of glutamatergic and GABAergic afferents in two major projections to the nucleus accumbens shell and raise important questions for functional studies.
Slc12a8 in the lateral hypothalamus maintains energy metabolism and skeletal muscle functions during aging

Cell reports

2022 Jul 26

Ito, N;Takatsu, A;Ito, H;Koike, Y;Yoshioka, K;Kamei, Y;Imai, SI;
PMID: 35905718 | DOI: 10.1016/j.celrep.2022.111131

Sarcopenia and frailty are urgent socio-economic problems worldwide. Here we demonstrate a functional connection between the lateral hypothalamus (LH) and skeletal muscle through Slc12a8, a recently identified nicotinamide mononucleotide transporter, and its relationship to sarcopenia and frailty. Slc12a8-expressing cells are mainly localized in the LH. LH-specific knockdown of Slc12a8 in young mice decreases activity-dependent energy and carbohydrate expenditure and skeletal muscle functions, including muscle mass, muscle force, intramuscular glycolysis, and protein synthesis. LH-specific Slc12a8 knockdown also decreases sympathetic nerve signals at neuromuscular junctions and β2-adrenergic receptors in skeletal muscle, indicating the importance of the LH-sympathetic nerve-β2-adrenergic receptor axis. LH-specific overexpression of Slc12a8 in aged mice significantly ameliorates age-associated decreases in energy expenditure and skeletal muscle functions. Our results highlight an important role of Slc12a8 in the LH for regulation of whole-body metabolism and skeletal muscle functions and provide insights into the pathogenesis of sarcopenia and frailty during aging.
Distinct Ventral Pallidal Neural Populations Mediate Separate Symptoms of Depression

Cell.

2017 Jul 13

Knowland D, Lilascharoen V, Pacia CP, Shin S, Wang EH, Lim BK.
PMID: 28689640 | DOI: 10.1016/j.cell.2017.06.015

Major depressive disorder (MDD) patients display a common but often variable set of symptoms making successful, sustained treatment difficult to achieve. Separate depressive symptoms may be encoded by differential changes in distinct circuits in the brain, yet how discrete circuits underlie behavioral subsets of depression and how they adapt in response to stress has not been addressed. We identify two discrete circuits of parvalbumin-positive (PV) neurons in the ventral pallidum (VP) projecting to either the lateral habenula or ventral tegmental area contributing to depression. We find that these populations undergo different electrophysiological adaptations in response to social defeat stress, which are normalized by antidepressant treatment. Furthermore, manipulation of each population mediates either social withdrawal or behavioral despair, but not both. We propose that distinct components of the VP PV circuit can subserve related, yet separate depressive-like phenotypes in mice, which could ultimately provide a platform for symptom-specific treatments of depression.

ITEM
RNAscope™ Probe- Hs-DMBT1 ?
Cat No. 478711
Manual Assay RNAscope

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  • View Details

    Specifications

    Gene :Dmbt1
    Species* :Human
    Species (common):Human
    Entrez Gene ID :1755
    Gene Alias :GP340
    Accession No:NM_004406.2
    Target Region [Base Pairs (bp)] :4038 - 4945
    No. of Pairs :20
    Assay Compatibility :RNAscope™ 2.5 HD Assay- BROWN, RNAscope™ 2.5 HD Assay- RED, RNAscope™ 2.5 HD Duplex Assay, RNAscope™ Multiplex Fluorescent Assay
    Shipping Temp :2-8 C
    Storage Temp :2-8 C
    Shelf Life :24 months from the date of manufacturing
    * Please check expiration dates on the reagent package
    Probe description :RNAscope™ Probe - Hs-DMBT1 - sapiens deleted in malignant brain tumors 1 (DMBT1) transcript variant 1 mRNA
    Channel :1
    RNAscope™ Assay Platform :Manual Assay RNAscope
  • Assay Compatibility
    RNAscope™ 2.5 HD Assay- BROWN
    RNAscope™ 2.5 HD Assay- RED
    RNAscope™ 2.5 HD Duplex Assay
    RNAscope™ Multiplex Fluorescent Assay
  • Recommended Controls
  • Product Insert/Data Sheet
    No Related Documents...

Specifications

Gene :Dmbt1
Species* :Human
Species (common):Human
Entrez Gene ID :1755
Gene Alias :GP340
Accession No:NM_004406.2
Target Region [Base Pairs (bp)] :4038 - 4945
No. of Pairs :20
Assay Compatibility :RNAscope™ 2.5 HD Assay- BROWN, RNAscope™ 2.5 HD Assay- RED, RNAscope™ 2.5 HD Duplex Assay, RNAscope™ Multiplex Fluorescent Assay
Shipping Temp :2-8 C
Storage Temp :2-8 C
Shelf Life :24 months from the date of manufacturing
* Please check expiration dates on the reagent package
Probe description :RNAscope™ Probe - Hs-DMBT1 - sapiens deleted in malignant brain tumors 1 (DMBT1) transcript variant 1 mRNA
Channel :1
RNAscope™ Assay Platform :Manual Assay RNAscope
RNAscope™ 2.5 HD Assay- BROWN
RNAscope™ 2.5 HD Assay- RED
RNAscope™ 2.5 HD Duplex Assay
RNAscope™ Multiplex Fluorescent Assay
No Related Documents...
ITEM
RNAscope™ 2.5 LS Probe- Hs-DMBT1-O1-C5 ?
Cat No. 525988-C5
Automated Assay for Leica Systems - RNAscope

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  • View Details

    Specifications

    Gene :Dmbt1
    Species* :Human
    Species (common):Human
    Entrez Gene ID :1755
    Gene Alias :GP340,SAG,muclin
    Accession No:NM_004406.2
    Target Region [Base Pairs (bp)] :3418 - 4409
    No. of Pairs :20
    Assay Compatibility :RNAscope™ 2.5 LS Assay on Leica BOND RX-BROWN, RNAscope™ 2.5 LS Assay on Leica BOND RX-RED
    Shipping Temp :2-8 C
    Storage Temp :2-8 C
    Shelf Life :24 months from the date of manufacturing
    * Please check expiration dates on the reagent package
    Probe description :RNAscope™ 2.5 LS Probe - Hs-DMBT1-O1-C5 - Homo sapiens deleted in malignant brain tumors 1 (DMBT1) transcript variant 1 mRNA
    Channel :5
    RNAscope™ Assay Platform :Automated Assay for Leica Systems - RNAscope
  • Assay Compatibility
    RNAscope™ 2.5 LS Assay on Leica BOND RX-BROWN, RNAscope™ 2.5 LS Assay on Leica BOND RX-RED
  • Recommended Controls
  • Product Insert/Data Sheet
    No Related Documents...

Specifications

Gene :Dmbt1
Species* :Human
Species (common):Human
Entrez Gene ID :1755
Gene Alias :GP340,SAG,muclin
Accession No:NM_004406.2
Target Region [Base Pairs (bp)] :3418 - 4409
No. of Pairs :20
Assay Compatibility :RNAscope™ 2.5 LS Assay on Leica BOND RX-BROWN, RNAscope™ 2.5 LS Assay on Leica BOND RX-RED
Shipping Temp :2-8 C
Storage Temp :2-8 C
Shelf Life :24 months from the date of manufacturing
* Please check expiration dates on the reagent package
Probe description :RNAscope™ 2.5 LS Probe - Hs-DMBT1-O1-C5 - Homo sapiens deleted in malignant brain tumors 1 (DMBT1) transcript variant 1 mRNA
Channel :5
RNAscope™ Assay Platform :Automated Assay for Leica Systems - RNAscope
RNAscope™ 2.5 LS Assay on Leica BOND RX-BROWN, RNAscope™ 2.5 LS Assay on Leica BOND RX-RED
No Related Documents...
ITEM
RNAscope™ 2.5 LS Probe- Hs-DMBT1-O1-C6 ?
Cat No. 525988-C6
Automated Assay for Leica Systems - RNAscope

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  • View Details

    Specifications

    Gene :Dmbt1
    Species* :Human
    Species (common):Human
    Entrez Gene ID :1755
    Gene Alias :GP340,SAG,muclin
    Accession No:NM_004406.2
    Target Region [Base Pairs (bp)] :3418 - 4409
    No. of Pairs :20
    Assay Compatibility :RNAscope™ 2.5 LS Assay on Leica BOND RX-BROWN, RNAscope™ 2.5 LS Assay on Leica BOND RX-RED
    Shipping Temp :2-8 C
    Storage Temp :2-8 C
    Shelf Life :24 months from the date of manufacturing
    * Please check expiration dates on the reagent package
    Probe description :RNAscope™ 2.5 LS Probe - Hs-DMBT1-O1-C6 - Homo sapiens deleted in malignant brain tumors 1 (DMBT1) transcript variant 1 mRNA
    Channel :6
    RNAscope™ Assay Platform :Automated Assay for Leica Systems - RNAscope
  • Assay Compatibility
    RNAscope™ 2.5 LS Assay on Leica BOND RX-BROWN, RNAscope™ 2.5 LS Assay on Leica BOND RX-RED
  • Recommended Controls
  • Product Insert/Data Sheet
    No Related Documents...

Specifications

Gene :Dmbt1
Species* :Human
Species (common):Human
Entrez Gene ID :1755
Gene Alias :GP340,SAG,muclin
Accession No:NM_004406.2
Target Region [Base Pairs (bp)] :3418 - 4409
No. of Pairs :20
Assay Compatibility :RNAscope™ 2.5 LS Assay on Leica BOND RX-BROWN, RNAscope™ 2.5 LS Assay on Leica BOND RX-RED
Shipping Temp :2-8 C
Storage Temp :2-8 C
Shelf Life :24 months from the date of manufacturing
* Please check expiration dates on the reagent package
Probe description :RNAscope™ 2.5 LS Probe - Hs-DMBT1-O1-C6 - Homo sapiens deleted in malignant brain tumors 1 (DMBT1) transcript variant 1 mRNA
Channel :6
RNAscope™ Assay Platform :Automated Assay for Leica Systems - RNAscope
RNAscope™ 2.5 LS Assay on Leica BOND RX-BROWN, RNAscope™ 2.5 LS Assay on Leica BOND RX-RED
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A GABAergic cell type in the lateral habenula links hypothalamic homeostatic and midbrain motivation circuits with sex steroid signaling ?
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Melanin-concentrating hormone and orexin systems in nucleus incertus: Dual innervation, bidirectional effects on neuron activity, and differential influences on arousal and feeding ?
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Description
sense
Example: Hs-LAG3-sense
Standard probes for RNA detection are in antisense. Sense probe is reverse complent to the corresponding antisense probe.
Intron#
Example: Mm-Htt-intron2
Probe targets the indicated intron in the target gene, commonly used for pre-mRNA detection
Pool/Pan
Example: Hs-CD3-pool (Hs-CD3D, Hs-CD3E, Hs-CD3G)
A mixture of multiple probe sets targeting multiple genes or transcripts
No-XSp
Example: Hs-PDGFB-No-XMm
Does not cross detect with the species (Sp)
XSp
Example: Rn-Pde9a-XMm
designed to cross detect with the species (Sp)
O#
Example: Mm-Islr-O1
Alternative design targeting different regions of the same transcript or isoforms
CDS
Example: Hs-SLC31A-CDS
Probe targets the protein-coding sequence only
EnEmProbe targets exons n and m
En-EmProbe targets region from exon n to exon m
Retired Nomenclature
tvn
Example: Hs-LEPR-tv1
Designed to target transcript variant n
ORF
Example: Hs-ACVRL1-ORF
Probe targets open reading frame
UTR
Example: Hs-HTT-UTR-C3
Probe targets the untranslated region (non-protein-coding region) only
5UTR
Example: Hs-GNRHR-5UTR
Probe targets the 5' untranslated region only
3UTR
Example: Rn-Npy1r-3UTR
Probe targets the 3' untranslated region only
Pan
Example: Pool
A mixture of multiple probe sets targeting multiple genes or transcripts

Enabling research, drug development (CDx) and diagnostics

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