ACD can configure probes for the various manual and automated assays for INS for RNAscope Assay, or for Basescope Assay compatible for your species of interest.
Transplantation Proceedings (2019)
2019 Jan 09
Mohamed M, Kang L, Zhang C, Edenfield B, Sykes J, Brown T, Johnson JL, Rehman F, Nguyen JH.
| DOI: doi. 10.1016/j.transproceed.2018.12.028
Aging cell
2022 Apr 01
Chandra, A;Lagnado, AB;Farr, JN;Doolittle, M;Tchkonia, T;Kirkland, JL;LeBrasseur, NK;Robbins, PD;Niedernhofer, LJ;Ikeno, Y;Passos, JF;Monroe, DG;Pignolo, RJ;Khosla, S;
PMID: 35363946 | DOI: 10.1111/acel.13602
The Journal of investigative dermatology
2021 Jul 17
Zhu, X;Leboeuf, M;Liu, F;Grachtchouk, M;Seykora, JT;Morrisey, EE;Dlugosz, AA;Millar, SE;
PMID: 34284046 | DOI: 10.1016/j.jid.2021.05.026
The American journal of pathology
2022 Oct 13
Gee, LMV;Barron-Millar, B;Leslie, J;Richardson, C;Zaki, MYW;Luli, S;Burgoyne, RA;Cameron, RIT;Smith, GR;Brain, JG;Innes, B;Jopson, L;Dyson, JK;McKay, KRC;Pechlivanis, A;Holmes, E;Berlinguer-Palmini, R;Victorelli, S;Mells, GF;Sandford, RN;Palmer, J;Kirby, JA;Kiourtis, C;Mokochinski, J;Hall, Z;Bird, TG;Borthwick, LA;Morris, CM;Hanson, PS;Jurk, D;Stoll, EA;LeBeau, FEN;Jones, DEJ;Oakley, F;
PMID: 36243043 | DOI: 10.1016/j.ajpath.2022.09.005
Cancer Research
2016 Apr 13
Crowther A, Ocasio J, Fang F, Meidinger J, Wu J, Deal AM, Chang SX, Yuan H, Schmid R, Davis I, Gershon TR.
PMID: - | DOI: 10.1158/0008-5472.CAN-15-0025
While treatments that induce DNA damage are commonly used as anti-cancer therapies, the mechanisms through which DNA damage produces a therapeutic response are incompletely understood. Here we have tested whether medulloblastomas must be competent for apoptosis to be sensitive to radiation therapy. Whether apoptosis is required for radiation sensitivity has been controversial. Medulloblastoma, the most common malignant brain tumor in children, is a biologically heterogeneous set of tumors typically sensitive to radiation and chemotherapy; 80% of medulloblastoma patients survive long-term after treatment. We used functional genetic studies to determine if the intrinsic apoptotic pathway is required for radiation to produce a therapeutic response in mice with primary, Shh-driven medulloblastoma. We found that cranial radiation extended the survival of medulloblastoma-bearing mice and induced widespread apoptosis. Expression analysis and conditional deletion studies showed that p53 was the predominant transcriptional regulator activated by radiation and was strictly required for treatment response. Deletion of Bax, which blocked apoptosis downstream of p53, was sufficient to render tumors radiation resistant. In apoptosis-incompetent, Bax-deleted tumors, radiation activated p53-dependent transcription without provoking cell death and caused two discrete populations to emerge. Most radiated tumor cells underwent terminal differentiation. Perivascular cells, however, quickly resumed proliferation despite p53 activation, behaved as stem cells, and rapidly drove recurrence. These data show that radiation must induce apoptosis in tumor stem cells to be effective. Mutations that disable the intrinsic apoptotic pathways are sufficient to impart radiation resistance. We suggest that medulloblastomas are typically sensitive to DNA-damaging therapies because they retain apoptosis competence.
Description | ||
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sense Example: Hs-LAG3-sense | Standard probes for RNA detection are in antisense. Sense probe is reverse complent to the corresponding antisense probe. | |
Intron# Example: Mm-Htt-intron2 | Probe targets the indicated intron in the target gene, commonly used for pre-mRNA detection | |
Pool/Pan Example: Hs-CD3-pool (Hs-CD3D, Hs-CD3E, Hs-CD3G) | A mixture of multiple probe sets targeting multiple genes or transcripts | |
No-XSp Example: Hs-PDGFB-No-XMm | Does not cross detect with the species (Sp) | |
XSp Example: Rn-Pde9a-XMm | designed to cross detect with the species (Sp) | |
O# Example: Mm-Islr-O1 | Alternative design targeting different regions of the same transcript or isoforms | |
CDS Example: Hs-SLC31A-CDS | Probe targets the protein-coding sequence only | |
EnEm | Probe targets exons n and m | |
En-Em | Probe targets region from exon n to exon m | |
Retired Nomenclature | ||
tvn Example: Hs-LEPR-tv1 | Designed to target transcript variant n | |
ORF Example: Hs-ACVRL1-ORF | Probe targets open reading frame | |
UTR Example: Hs-HTT-UTR-C3 | Probe targets the untranslated region (non-protein-coding region) only | |
5UTR Example: Hs-GNRHR-5UTR | Probe targets the 5' untranslated region only | |
3UTR Example: Rn-Npy1r-3UTR | Probe targets the 3' untranslated region only | |
Pan Example: Pool | A mixture of multiple probe sets targeting multiple genes or transcripts |
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