ACD can configure probes for the various manual and automated assays for INS for RNAscope Assay, or for Basescope Assay compatible for your species of interest.
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Gene : | SV40polyA |
Species* : | Cloning vector |
Species (common): | Cloning vector AAV |
Entrez Gene ID : | N/A |
Gene Alias : | N/A |
Accession No: | JN898962.1:2070-2291 |
Target Region [Base Pairs (bp)] : | 7 - 181 |
No. of Pairs : | 3 |
Assay Compatibility : | RNAscope™ 2.5 LS Assay on Leica BOND RX-BROWN, RNAscope™ 2.5 LS Assay on Leica BOND RX-RED |
Shipping Temp : | 2-8 C |
Storage Temp : | 2-8 C |
Shelf Life : | 24 months from the date of manufacturing * Please check expiration dates on the reagent package |
Probe description : | RNAscope™ 2.5 LS Probe - V-SV40polyA-C6 - gi|357595821|gb|JN898962.1| Cloning vector AAV 2070-2291 (SV40polyA) in primates |
Channel : | 6 |
RNAscope™ Assay Platform : | Automated Assay for Leica Systems - RNAscope |
Gene : | SV40polyA |
Species* : | Cloning vector |
Species (common): | Cloning vector AAV |
Entrez Gene ID : | N/A |
Gene Alias : | N/A |
Accession No: | JN898962.1:2070-2291 |
Target Region [Base Pairs (bp)] : | 7 - 181 |
No. of Pairs : | 3 |
Assay Compatibility : | RNAscope™ 2.5 LS Assay on Leica BOND RX-BROWN, RNAscope™ 2.5 LS Assay on Leica BOND RX-RED |
Shipping Temp : | 2-8 C |
Storage Temp : | 2-8 C |
Shelf Life : | 24 months from the date of manufacturing * Please check expiration dates on the reagent package |
Probe description : | RNAscope™ 2.5 LS Probe - V-SV40polyA-C6 - gi|357595821|gb|JN898962.1| Cloning vector AAV 2070-2291 (SV40polyA) in primates |
Channel : | 6 |
RNAscope™ Assay Platform : | Automated Assay for Leica Systems - RNAscope |
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Gene : | FI6 |
Species* : | Other |
Species (common): | Unclassified |
Entrez Gene ID : | N/A |
Gene Alias : | N/A |
Accession No : | N/A |
Target Region [Base Pairs (bp)] : | 104 - 1517 |
No. of Pairs : | 20 |
Assay Compatibility : | RNAscope™ 2.5 LS Assay on Leica BOND RX-BROWN, RNAscope™ 2.5 LS Assay on Leica BOND RX-RED |
Shipping Temp : | 2-8 C |
Storage Temp : | 2-8 C |
Shelf Life : | 24 months from the date of manufacturing * Please check expiration dates on the reagent package |
Probe description : | immunoadhesin custom sequence expressed in mouse (FI6) |
Channel : | 6 |
RNAscope™ Assay Platform : | Automated Assay for Leica Systems - RNAscope |
Gene : | FI6 |
Species* : | Other |
Species (common): | Unclassified |
Entrez Gene ID : | N/A |
Gene Alias : | N/A |
Accession No : | N/A |
Target Region [Base Pairs (bp)] : | 104 - 1517 |
No. of Pairs : | 20 |
Assay Compatibility : | RNAscope™ 2.5 LS Assay on Leica BOND RX-BROWN, RNAscope™ 2.5 LS Assay on Leica BOND RX-RED |
Shipping Temp : | 2-8 C |
Storage Temp : | 2-8 C |
Shelf Life : | 24 months from the date of manufacturing * Please check expiration dates on the reagent package |
Probe description : | immunoadhesin custom sequence expressed in mouse (FI6) |
Channel : | 6 |
RNAscope™ Assay Platform : | Automated Assay for Leica Systems - RNAscope |
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Gene : | nifA |
Species* : | Other |
Species (common): | Unclassified |
Entrez Gene ID : | N/A |
Gene Alias : | N/A |
Accession No: | gi|354952622:8079973-8081790 |
Target Region [Base Pairs (bp)] : | 2 - 1072 |
No. of Pairs : | 20 |
Assay Compatibility : | RNAscope™ 2.5 LS Assay on Leica BOND RX-BROWN, RNAscope™ 2.5 LS Assay on Leica BOND RX-RED |
Shipping Temp : | 2-8 C |
Storage Temp : | 2-8 C |
Shelf Life : | 24 months from the date of manufacturing * Please check expiration dates on the reagent package |
Probe description : | LS 2.5 Probe - B-BJaponicum-nifA-C6 - Bradyrhizobium japonicum USDA 6 DNA complement nifA gene (nifA) in human |
Channel : | 6 |
RNAscope™ Assay Platform : | Automated Assay for Leica Systems - RNAscope |
Gene : | nifA |
Species* : | Other |
Species (common): | Unclassified |
Entrez Gene ID : | N/A |
Gene Alias : | N/A |
Accession No: | gi|354952622:8079973-8081790 |
Target Region [Base Pairs (bp)] : | 2 - 1072 |
No. of Pairs : | 20 |
Assay Compatibility : | RNAscope™ 2.5 LS Assay on Leica BOND RX-BROWN, RNAscope™ 2.5 LS Assay on Leica BOND RX-RED |
Shipping Temp : | 2-8 C |
Storage Temp : | 2-8 C |
Shelf Life : | 24 months from the date of manufacturing * Please check expiration dates on the reagent package |
Probe description : | LS 2.5 Probe - B-BJaponicum-nifA-C6 - Bradyrhizobium japonicum USDA 6 DNA complement nifA gene (nifA) in human |
Channel : | 6 |
RNAscope™ Assay Platform : | Automated Assay for Leica Systems - RNAscope |
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Gene : | 16SrRNA |
Species* : | Other |
Species (common): | Unclassified |
Entrez Gene ID : | N/A |
Gene Alias : | N/A |
Accession No: | gi|354952622:1584428-1585841 |
Target Region [Base Pairs (bp)] : | 17 - 1398 |
No. of Pairs : | 20 |
Assay Compatibility : | RNAscope™ 2.5 LS Assay on Leica BOND RX-BROWN, RNAscope™ 2.5 LS Assay on Leica BOND RX-RED |
Shipping Temp : | 2-8 C |
Storage Temp : | 2-8 C |
Shelf Life : | 24 months from the date of manufacturing * Please check expiration dates on the reagent package |
Probe description : | LS 2.5 Probe - B-BJaponicum-16SrRNA-C6 - Bradyrhizobium japonicum USDA 6 DNA 16S ribosomal RNA (16SrRNA) in human |
Channel : | 6 |
RNAscope™ Assay Platform : | Automated Assay for Leica Systems - RNAscope |
Gene : | 16SrRNA |
Species* : | Other |
Species (common): | Unclassified |
Entrez Gene ID : | N/A |
Gene Alias : | N/A |
Accession No: | gi|354952622:1584428-1585841 |
Target Region [Base Pairs (bp)] : | 17 - 1398 |
No. of Pairs : | 20 |
Assay Compatibility : | RNAscope™ 2.5 LS Assay on Leica BOND RX-BROWN, RNAscope™ 2.5 LS Assay on Leica BOND RX-RED |
Shipping Temp : | 2-8 C |
Storage Temp : | 2-8 C |
Shelf Life : | 24 months from the date of manufacturing * Please check expiration dates on the reagent package |
Probe description : | LS 2.5 Probe - B-BJaponicum-16SrRNA-C6 - Bradyrhizobium japonicum USDA 6 DNA 16S ribosomal RNA (16SrRNA) in human |
Channel : | 6 |
RNAscope™ Assay Platform : | Automated Assay for Leica Systems - RNAscope |
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Gene : | B-Bifido-16SrRNA |
Species* : | Other |
Species (common): | Unclassified |
Entrez Gene ID : | N/A |
Gene Alias : | N/A |
Accession No: | FR775389.1 |
Target Region [Base Pairs (bp)] : | 2 - 477 |
No. of Pairs : | 10 |
Assay Compatibility : | RNAscope™ 2.5 LS Assay on Leica BOND RX-BROWN, RNAscope™ 2.5 LS Assay on Leica BOND RX-RED |
Shipping Temp : | 2-8 C |
Storage Temp : | 2-8 C |
Shelf Life : | 24 months from the date of manufacturing * Please check expiration dates on the reagent package |
Probe description : | Uncultured Bifidobacterium sp. partial 16S rRNA gene isolate DGGE band 090626B11 for detection in mouse |
Channel : | 6 |
RNAscope™ Assay Platform : | Automated Assay for Leica Systems - RNAscope |
Gene : | B-Bifido-16SrRNA |
Species* : | Other |
Species (common): | Unclassified |
Entrez Gene ID : | N/A |
Gene Alias : | N/A |
Accession No: | FR775389.1 |
Target Region [Base Pairs (bp)] : | 2 - 477 |
No. of Pairs : | 10 |
Assay Compatibility : | RNAscope™ 2.5 LS Assay on Leica BOND RX-BROWN, RNAscope™ 2.5 LS Assay on Leica BOND RX-RED |
Shipping Temp : | 2-8 C |
Storage Temp : | 2-8 C |
Shelf Life : | 24 months from the date of manufacturing * Please check expiration dates on the reagent package |
Probe description : | Uncultured Bifidobacterium sp. partial 16S rRNA gene isolate DGGE band 090626B11 for detection in mouse |
Channel : | 6 |
RNAscope™ Assay Platform : | Automated Assay for Leica Systems - RNAscope |
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Gene : | L1-AS-target1 |
Species* : | Human |
Species (common): | Human |
Entrez Gene ID : | N/A |
Gene Alias : | N/A |
Accession No: | AF148856.1 |
Target Region [Base Pairs (bp)] : | 2 - 161 |
No. of Pairs : | 4 |
Assay Compatibility : | RNAscope™ 2.5 LS Assay on Leica BOND RX-BROWN, RNAscope™ 2.5 LS Assay on Leica BOND RX-RED |
Shipping Temp : | 2-8 C |
Storage Temp : | 2-8 C |
Shelf Life : | 24 months from the date of manufacturing * Please check expiration dates on the reagent package |
Probe description : | RNAscope™ LS 2.5 Probe - Hs-L1-AS-target1-C6 - Homo sapiens retrotransposon L1 insertion in X-linked retinitis pigmentosalocuscomplement 261-426 (L1-AS-target1) |
Channel : | 6 |
RNAscope™ Assay Platform : | Automated Assay for Leica Systems - RNAscope |
Gene : | L1-AS-target1 |
Species* : | Human |
Species (common): | Human |
Entrez Gene ID : | N/A |
Gene Alias : | N/A |
Accession No: | AF148856.1 |
Target Region [Base Pairs (bp)] : | 2 - 161 |
No. of Pairs : | 4 |
Assay Compatibility : | RNAscope™ 2.5 LS Assay on Leica BOND RX-BROWN, RNAscope™ 2.5 LS Assay on Leica BOND RX-RED |
Shipping Temp : | 2-8 C |
Storage Temp : | 2-8 C |
Shelf Life : | 24 months from the date of manufacturing * Please check expiration dates on the reagent package |
Probe description : | RNAscope™ LS 2.5 Probe - Hs-L1-AS-target1-C6 - Homo sapiens retrotransposon L1 insertion in X-linked retinitis pigmentosalocuscomplement 261-426 (L1-AS-target1) |
Channel : | 6 |
RNAscope™ Assay Platform : | Automated Assay for Leica Systems - RNAscope |
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Gene : | L1-AS-target2 |
Species* : | Human |
Species (common): | Human |
Entrez Gene ID : | N/A |
Gene Alias : | N/A |
Accession No: | AF148856.1 |
Target Region [Base Pairs (bp)] : | 2 - 103 |
No. of Pairs : | 2 |
Assay Compatibility : | RNAscope™ 2.5 LS Assay on Leica BOND RX-BROWN, RNAscope™ 2.5 LS Assay on Leica BOND RX-RED |
Shipping Temp : | 2-8 C |
Storage Temp : | 2-8 C |
Shelf Life : | 24 months from the date of manufacturing * Please check expiration dates on the reagent package |
Probe description : | RNAscope™ LS 2.5 Probe - Hs-L1-AS-target2-C6 - Homo sapiens retrotransposon L1 insertion in X-linked retinitis pigmentosalocuscomplement 1-115 (L1-AS-target2) |
Channel : | 6 |
RNAscope™ Assay Platform : | Automated Assay for Leica Systems - RNAscope |
Gene : | L1-AS-target2 |
Species* : | Human |
Species (common): | Human |
Entrez Gene ID : | N/A |
Gene Alias : | N/A |
Accession No: | AF148856.1 |
Target Region [Base Pairs (bp)] : | 2 - 103 |
No. of Pairs : | 2 |
Assay Compatibility : | RNAscope™ 2.5 LS Assay on Leica BOND RX-BROWN, RNAscope™ 2.5 LS Assay on Leica BOND RX-RED |
Shipping Temp : | 2-8 C |
Storage Temp : | 2-8 C |
Shelf Life : | 24 months from the date of manufacturing * Please check expiration dates on the reagent package |
Probe description : | RNAscope™ LS 2.5 Probe - Hs-L1-AS-target2-C6 - Homo sapiens retrotransposon L1 insertion in X-linked retinitis pigmentosalocuscomplement 1-115 (L1-AS-target2) |
Channel : | 6 |
RNAscope™ Assay Platform : | Automated Assay for Leica Systems - RNAscope |
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Gene : | V-EBV-LMP2A |
Species* : | Human herpesvirus |
Species (common): | Epstein-Barr virus |
Entrez Gene ID : | N/A |
Gene Alias : | N/A |
Accession No: | gi|82503188:166011-166458 |
Target Region [Base Pairs (bp)] : | 9 - 447 |
No. of Pairs : | 8 |
Assay Compatibility : | RNAscope™ 2.5 LS Assay on Leica BOND RX-BROWN, RNAscope™ 2.5 LS Assay on Leica BOND RX-RED |
Shipping Temp : | 2-8 C |
Storage Temp : | 2-8 C |
Shelf Life : | 24 months from the date of manufacturing * Please check expiration dates on the reagent package |
Probe description : | RNAscope™ 2.5 LS Probe - V-EBV-LMP2A-C6 - Human herpesvirus 4 complete wild type genome detection in human and mouse tissue |
Channel : | 6 |
RNAscope™ Assay Platform : | Automated Assay for Leica Systems - RNAscope |
Gene : | V-EBV-LMP2A |
Species* : | Human herpesvirus |
Species (common): | Epstein-Barr virus |
Entrez Gene ID : | N/A |
Gene Alias : | N/A |
Accession No: | gi|82503188:166011-166458 |
Target Region [Base Pairs (bp)] : | 9 - 447 |
No. of Pairs : | 8 |
Assay Compatibility : | RNAscope™ 2.5 LS Assay on Leica BOND RX-BROWN, RNAscope™ 2.5 LS Assay on Leica BOND RX-RED |
Shipping Temp : | 2-8 C |
Storage Temp : | 2-8 C |
Shelf Life : | 24 months from the date of manufacturing * Please check expiration dates on the reagent package |
Probe description : | RNAscope™ 2.5 LS Probe - V-EBV-LMP2A-C6 - Human herpesvirus 4 complete wild type genome detection in human and mouse tissue |
Channel : | 6 |
RNAscope™ Assay Platform : | Automated Assay for Leica Systems - RNAscope |
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Gene : | HA |
Species* : | Influenza virus |
Species (common): | Influenza A virus (A/swine/Illinois/A01244830/2013(H1N2)) |
Entrez Gene ID : | N/A |
Gene Alias : | N/A |
Accession No : | N/A |
Target Region [Base Pairs (bp)] : | 21 - 863 |
No. of Pairs : | 15 |
Assay Compatibility : | RNAscope™ 2.5 LS Assay on Leica BOND RX-BROWN, RNAscope™ 2.5 LS Assay on Leica BOND RX-RED |
Shipping Temp : | 2-8 C |
Storage Temp : | 2-8 C |
Shelf Life : | 24 months from the date of manufacturing * Please check expiration dates on the reagent package |
Probe description : | RNAscope™ 2.5 LS Probe - V-Influenza-HA-O1-C6 - Hemagglutanin A/Turkey/Turkey/1/2005 (HA) detection in mouse tissues |
Channel : | 6 |
RNAscope™ Assay Platform : | Automated Assay for Leica Systems - RNAscope |
Gene : | HA |
Species* : | Influenza virus |
Species (common): | Influenza A virus (A/swine/Illinois/A01244830/2013(H1N2)) |
Entrez Gene ID : | N/A |
Gene Alias : | N/A |
Accession No : | N/A |
Target Region [Base Pairs (bp)] : | 21 - 863 |
No. of Pairs : | 15 |
Assay Compatibility : | RNAscope™ 2.5 LS Assay on Leica BOND RX-BROWN, RNAscope™ 2.5 LS Assay on Leica BOND RX-RED |
Shipping Temp : | 2-8 C |
Storage Temp : | 2-8 C |
Shelf Life : | 24 months from the date of manufacturing * Please check expiration dates on the reagent package |
Probe description : | RNAscope™ 2.5 LS Probe - V-Influenza-HA-O1-C6 - Hemagglutanin A/Turkey/Turkey/1/2005 (HA) detection in mouse tissues |
Channel : | 6 |
RNAscope™ Assay Platform : | Automated Assay for Leica Systems - RNAscope |
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Gene : | GAL4 |
Species* : | Other |
Species (common): | Unclassified |
Entrez Gene ID : | 855828 |
Gene Alias : | YPL248C,GAL81 |
Accession No: | NM_001184062.1 |
Target Region [Base Pairs (bp)] : | 2 - 1055 |
No. of Pairs : | 20 |
Assay Compatibility : | RNAscope™ 2.5 LS Assay on Leica BOND RX-BROWN, RNAscope™ 2.5 LS Assay on Leica BOND RX-RED |
Shipping Temp : | 2-8 C |
Storage Temp : | 2-8 C |
Shelf Life : | 24 months from the date of manufacturing * Please check expiration dates on the reagent package |
Probe description : | Saccharomyces cerevisiae S288c Gal4p (GAL4) mRNA for detection in Drosophila |
Channel : | 6 |
RNAscope™ Assay Platform : | Automated Assay for Leica Systems - RNAscope |
Gene : | GAL4 |
Species* : | Other |
Species (common): | Unclassified |
Entrez Gene ID : | 855828 |
Gene Alias : | YPL248C,GAL81 |
Accession No: | NM_001184062.1 |
Target Region [Base Pairs (bp)] : | 2 - 1055 |
No. of Pairs : | 20 |
Assay Compatibility : | RNAscope™ 2.5 LS Assay on Leica BOND RX-BROWN, RNAscope™ 2.5 LS Assay on Leica BOND RX-RED |
Shipping Temp : | 2-8 C |
Storage Temp : | 2-8 C |
Shelf Life : | 24 months from the date of manufacturing * Please check expiration dates on the reagent package |
Probe description : | Saccharomyces cerevisiae S288c Gal4p (GAL4) mRNA for detection in Drosophila |
Channel : | 6 |
RNAscope™ Assay Platform : | Automated Assay for Leica Systems - RNAscope |
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Gene : | GaL4_Dm_co |
Species* : | Other |
Species (common): | Unclassified |
Entrez Gene ID : | N/A |
Gene Alias : | N/A |
Accession No : | N/A |
Target Region [Base Pairs (bp)] : | 1133 - 2098 |
No. of Pairs : | 20 |
Assay Compatibility : | RNAscope™ 2.5 LS Assay on Leica BOND RX-BROWN, RNAscope™ 2.5 LS Assay on Leica BOND RX-RED |
Shipping Temp : | 2-8 C |
Storage Temp : | 2-8 C |
Shelf Life : | 24 months from the date of manufacturing * Please check expiration dates on the reagent package |
Probe description : | optimized GAL4 for drosophila (GaL4_Dm_co) for detection in Drosophila |
Channel : | 6 |
RNAscope™ Assay Platform : | Automated Assay for Leica Systems - RNAscope |
Gene : | GaL4_Dm_co |
Species* : | Other |
Species (common): | Unclassified |
Entrez Gene ID : | N/A |
Gene Alias : | N/A |
Accession No : | N/A |
Target Region [Base Pairs (bp)] : | 1133 - 2098 |
No. of Pairs : | 20 |
Assay Compatibility : | RNAscope™ 2.5 LS Assay on Leica BOND RX-BROWN, RNAscope™ 2.5 LS Assay on Leica BOND RX-RED |
Shipping Temp : | 2-8 C |
Storage Temp : | 2-8 C |
Shelf Life : | 24 months from the date of manufacturing * Please check expiration dates on the reagent package |
Probe description : | optimized GAL4 for drosophila (GaL4_Dm_co) for detection in Drosophila |
Channel : | 6 |
RNAscope™ Assay Platform : | Automated Assay for Leica Systems - RNAscope |
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Gene : | CMVenhancer |
Species* : | Cloning vector |
Species (common): | Cloning vector CMV |
Entrez Gene ID : | N/A |
Gene Alias : | N/A |
Accession No : | N/A |
Target Region [Base Pairs (bp)] : | 2 - 617 |
No. of Pairs : | 8 |
Assay Compatibility : | RNAscope™ 2.5 LS Assay on Leica BOND RX-BROWN, RNAscope™ 2.5 LS Assay on Leica BOND RX-RED |
Shipping Temp : | 2-8 C |
Storage Temp : | 2-8 C |
Shelf Life : | 24 months from the date of manufacturing * Please check expiration dates on the reagent package |
Probe description : | RNAscope™ 2.5 LS Probe - V-CMV-enhancer-C6 - enhancer (CMVenhancer) 98% homology to gi|148807251|gb|EF591490.1| Gene-trap donor vector pZGs 4587-5248 detection in mouse |
Channel : | 6 |
RNAscope™ Assay Platform : | Automated Assay for Leica Systems - RNAscope |
Gene : | CMVenhancer |
Species* : | Cloning vector |
Species (common): | Cloning vector CMV |
Entrez Gene ID : | N/A |
Gene Alias : | N/A |
Accession No : | N/A |
Target Region [Base Pairs (bp)] : | 2 - 617 |
No. of Pairs : | 8 |
Assay Compatibility : | RNAscope™ 2.5 LS Assay on Leica BOND RX-BROWN, RNAscope™ 2.5 LS Assay on Leica BOND RX-RED |
Shipping Temp : | 2-8 C |
Storage Temp : | 2-8 C |
Shelf Life : | 24 months from the date of manufacturing * Please check expiration dates on the reagent package |
Probe description : | RNAscope™ 2.5 LS Probe - V-CMV-enhancer-C6 - enhancer (CMVenhancer) 98% homology to gi|148807251|gb|EF591490.1| Gene-trap donor vector pZGs 4587-5248 detection in mouse |
Channel : | 6 |
RNAscope™ Assay Platform : | Automated Assay for Leica Systems - RNAscope |
Description | ||
---|---|---|
sense Example: Hs-LAG3-sense | Standard probes for RNA detection are in antisense. Sense probe is reverse complent to the corresponding antisense probe. | |
Intron# Example: Mm-Htt-intron2 | Probe targets the indicated intron in the target gene, commonly used for pre-mRNA detection | |
Pool/Pan Example: Hs-CD3-pool (Hs-CD3D, Hs-CD3E, Hs-CD3G) | A mixture of multiple probe sets targeting multiple genes or transcripts | |
No-XSp Example: Hs-PDGFB-No-XMm | Does not cross detect with the species (Sp) | |
XSp Example: Rn-Pde9a-XMm | designed to cross detect with the species (Sp) | |
O# Example: Mm-Islr-O1 | Alternative design targeting different regions of the same transcript or isoforms | |
CDS Example: Hs-SLC31A-CDS | Probe targets the protein-coding sequence only | |
EnEm | Probe targets exons n and m | |
En-Em | Probe targets region from exon n to exon m | |
Retired Nomenclature | ||
tvn Example: Hs-LEPR-tv1 | Designed to target transcript variant n | |
ORF Example: Hs-ACVRL1-ORF | Probe targets open reading frame | |
UTR Example: Hs-HTT-UTR-C3 | Probe targets the untranslated region (non-protein-coding region) only | |
5UTR Example: Hs-GNRHR-5UTR | Probe targets the 5' untranslated region only | |
3UTR Example: Rn-Npy1r-3UTR | Probe targets the 3' untranslated region only | |
Pan Example: Pool | A mixture of multiple probe sets targeting multiple genes or transcripts |
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