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Probes for INS

ACD can configure probes for the various manual and automated assays for INS for RNAscope Assay, or for Basescope Assay compatible for your species of interest.

  • Probes for INS (0)
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Gene

  • Gad1 (50) Apply Gad1 filter
  • Slc17a6 (32) Apply Slc17a6 filter
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  • Gad2 (27) Apply Gad2 filter
  • egfp (25) Apply egfp filter
  • PVALB (24) Apply PVALB filter
  • Slc17a7 (23) Apply Slc17a7 filter
  • tdTomato (23) Apply tdTomato filter
  • TH (22) Apply TH filter
  • Crh (18) Apply Crh filter
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  • VGluT1 (12) Apply VGluT1 filter
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  • (-) Remove RNAscope Fluorescent Multiplex Assay filter RNAscope Fluorescent Multiplex Assay (2)

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  • Neuroscience (2) Apply Neuroscience filter
  • Alcohol Withdrawl (1) Apply Alcohol Withdrawl filter
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  • Psychiatry (1) Apply Psychiatry filter

Category

  • Publications (2) Apply Publications filter
Cell-type specific changes in PKC-delta neurons of the central amygdala during alcohol withdrawal

Translational psychiatry

2022 Jul 20

Dilly, GA;Kittleman, CW;Kerr, TM;Messing, RO;Mayfield, RD;
PMID: 35859068 | DOI: 10.1038/s41398-022-02063-0

The central amygdala (CeA) contains a diverse population of cells, including multiple subtypes of GABAergic neurons, along with glia and epithelial cells. Specific CeA cell types have been shown to affect alcohol consumption in animal models of dependence and may be involved in negative affect during alcohol withdrawal. We used single-nuclei RNA sequencing to determine cell-type specificity of differential gene expression in the CeA induced by alcohol withdrawal. Cells within the CeA were classified using unbiased clustering analyses and identified based on the expression of known marker genes. Differential gene expression analysis was performed on each identified CeA cell-type. It revealed differential gene expression in astrocytes and GABAergic neurons associated with alcohol withdrawal. GABAergic neurons were further subclassified into 13 clusters of cells. Analyzing transcriptomic responses in these subclusters revealed that alcohol exposure induced multiple differentially expressed genes in one subtype of CeA GABAergic neurons, the protein kinase C delta (PKCδ) expressing neurons. These results suggest that PKCδ neurons in the CeA may be uniquely sensitive to the effects of alcohol exposure and identify a novel population of cells in CeA associated with alcohol withdrawal.
Fibroblast Growth Factor Regulates Olfactory Bulb Formation by Controlling Radial Glial Cell Development

SSRN Electronic Journal

2022 Nov 10

Ito, A;Imamura, F;
| DOI: 10.2139/ssrn.4267408

Fibroblast growth factor (FGF) signaling plays several important roles in the development of the central nervous system. During the mid-gestation stage, FGF receptors (FGFRs) are expressed in the ventricular zone of the telencephalon and regulate the proliferation and neuronal differentiation of radial glial cells (RGCs). Inhibition of FGFR signaling at this stage results in abnormal brain formation, particularly loss of FGFR1 signaling causes hypoplasia of the olfactory bulb (OB). However, how FGFR1 signaling regulates OB formation is not fully understood. In this study, we inhibited FGFR1 signaling specifically in the anterior telencephalon, where OBs develop, and examined its effects on the development of RGCs in the OB (OB RGCs) and OB formation. The results suggest that inhibition of FGFR1 signaling causes a shift in the state of OB RGCs from proliferation to neuronal differentiation, resulting in an insufficient number of OB projection neurons. Furthermore, activation of Notch signaling, which maintains the self-renewal state of OB RGCs, partially rescued the early abnormal OB formation caused by inhibition of FGFR1 signaling. In contrast, inhibition of FGFR1 signaling in lateral ganglionic eminence did not affect the production of OB interneurons or OB formation. Moreover, the early abnormal OB formation induced by inhibition of FGFR1 signaling could be rescued by overactivation of Notch signaling, which maintains the proliferative state of radial glial cells. These results suggest that FGFR1 signaling regulates normal OB formation by controlling OB RGCs to produce a normal number of OB projection neurons.
X
Description
sense
Example: Hs-LAG3-sense
Standard probes for RNA detection are in antisense. Sense probe is reverse complent to the corresponding antisense probe.
Intron#
Example: Mm-Htt-intron2
Probe targets the indicated intron in the target gene, commonly used for pre-mRNA detection
Pool/Pan
Example: Hs-CD3-pool (Hs-CD3D, Hs-CD3E, Hs-CD3G)
A mixture of multiple probe sets targeting multiple genes or transcripts
No-XSp
Example: Hs-PDGFB-No-XMm
Does not cross detect with the species (Sp)
XSp
Example: Rn-Pde9a-XMm
designed to cross detect with the species (Sp)
O#
Example: Mm-Islr-O1
Alternative design targeting different regions of the same transcript or isoforms
CDS
Example: Hs-SLC31A-CDS
Probe targets the protein-coding sequence only
EnEmProbe targets exons n and m
En-EmProbe targets region from exon n to exon m
Retired Nomenclature
tvn
Example: Hs-LEPR-tv1
Designed to target transcript variant n
ORF
Example: Hs-ACVRL1-ORF
Probe targets open reading frame
UTR
Example: Hs-HTT-UTR-C3
Probe targets the untranslated region (non-protein-coding region) only
5UTR
Example: Hs-GNRHR-5UTR
Probe targets the 5' untranslated region only
3UTR
Example: Rn-Npy1r-3UTR
Probe targets the 3' untranslated region only
Pan
Example: Pool
A mixture of multiple probe sets targeting multiple genes or transcripts

Enabling research, drug development (CDx) and diagnostics

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