ACD can configure probes for the various manual and automated assays for INS for RNAscope Assay, or for Basescope Assay compatible for your species of interest.
The American journal of psychiatry
2022 Sep 21
Kim, SH;An, K;Namkung, H;Saito, A;Rannals, MD;Moore, JR;Mihaljevic, M;Saha, S;Oh, S;Kondo, MA;Ishizuka, K;Yang, K;Maher, BJ;Niwa, M;Sawa, A;
PMID: 36128683 | DOI: 10.1176/appi.ajp.21010053
Development.
2018 Jul 09
Metzler MA, Raja S, Elliott KH, Friedl RM, Tran NQH, Brugmann SA, Larsen M, Sandell LL.
PMID: 29986869 | DOI: 10.1242/dev.164822
In mammals, the epithelial tissues of major salivary glands generate saliva and drain it into the oral cavity. For submandibular salivary glands (SMG), it is known that the epithelial tissues arise during embryogenesis from naïve oral ectoderm adjacent to the base of the tongue, which begins to thicken, express SOX9, and invaginate into underlying mesenchyme. The developmental mechanisms initiating salivary gland development remain unexplored. In this study we show that retinoic acid (RA) signaling activity at the site of gland initiation is co-localized with expression of retinol metabolic genes Rdh10, and Aldh1a2 in the underlying SMG mesenchyme. Utilizing a novel ex vivo assay for SMG initiation developed for this study, we show that RDH10 and RA are required for salivary gland initiation. Moreover, we show that the requirement for RA in gland initiation involves canonical signaling through retinoic acid receptors (RAR). Finally, we show that RA signaling essential for gland initiation is transduced specifically through RARα, with no contribution from other RAR isoforms. This is the first study to identify a molecular signal regulating mammalian salivary gland initiation.
Nature genetics
2022 Jul 21
Hu, B;Lelek, S;Spanjaard, B;El-Sammak, H;Simões, MG;Mintcheva, J;Aliee, H;Schäfer, R;Meyer, AM;Theis, F;Stainier, DYR;Panáková, D;Junker, JP;
PMID: 35864193 | DOI: 10.1038/s41588-022-01129-5
eLife
2022 Jun 24
Sehring, I;Mohammadi, HF;Haffner-Luntzer, M;Ignatius, A;Huber-Lang, M;Weidinger, G;
PMID: 35748539 | DOI: 10.7554/eLife.77614
Description | ||
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sense Example: Hs-LAG3-sense | Standard probes for RNA detection are in antisense. Sense probe is reverse complent to the corresponding antisense probe. | |
Intron# Example: Mm-Htt-intron2 | Probe targets the indicated intron in the target gene, commonly used for pre-mRNA detection | |
Pool/Pan Example: Hs-CD3-pool (Hs-CD3D, Hs-CD3E, Hs-CD3G) | A mixture of multiple probe sets targeting multiple genes or transcripts | |
No-XSp Example: Hs-PDGFB-No-XMm | Does not cross detect with the species (Sp) | |
XSp Example: Rn-Pde9a-XMm | designed to cross detect with the species (Sp) | |
O# Example: Mm-Islr-O1 | Alternative design targeting different regions of the same transcript or isoforms | |
CDS Example: Hs-SLC31A-CDS | Probe targets the protein-coding sequence only | |
EnEm | Probe targets exons n and m | |
En-Em | Probe targets region from exon n to exon m | |
Retired Nomenclature | ||
tvn Example: Hs-LEPR-tv1 | Designed to target transcript variant n | |
ORF Example: Hs-ACVRL1-ORF | Probe targets open reading frame | |
UTR Example: Hs-HTT-UTR-C3 | Probe targets the untranslated region (non-protein-coding region) only | |
5UTR Example: Hs-GNRHR-5UTR | Probe targets the 5' untranslated region only | |
3UTR Example: Rn-Npy1r-3UTR | Probe targets the 3' untranslated region only | |
Pan Example: Pool | A mixture of multiple probe sets targeting multiple genes or transcripts |
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