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Probes for CD4

ACD can configure probes for the various manual and automated assays for CD4 for RNAscope Assay, or for Basescope Assay compatible for your species of interest.

ACD’s data images for CD4 gene.

  • RNA expression of CD4 gene in Human Esophageal cancer sample using RNAscope™ 2.5 HD Assay Brown

  • RNA expression of CD4 gene in Human Glioma sample using RNAscope™ 2.5 HD Assay Brown

  • RNA expression of CD4 gene in Human Lymphoma sample using RNAscope™ 2.5 HD Assay Brown

  • Probes for CD4 (0)
  • Kits & Accessories (0)
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  • Publications (2)
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Refine Probe List

Content for comparison

Gene

  • CD4 (16) Apply CD4 filter
  • TBD (7) Apply TBD filter
  • SIV (6) Apply SIV filter
  • Ifng (5) Apply Ifng filter
  • HIV (5) Apply HIV filter
  • Cd8a (4) Apply Cd8a filter
  • CXCL10 (4) Apply CXCL10 filter
  • Cd8 (4) Apply Cd8 filter
  • Foxp3 (3) Apply Foxp3 filter
  • CD3 (3) Apply CD3 filter
  • IL17A (2) Apply IL17A filter
  • IL-10 (2) Apply IL-10 filter
  • CXCL9 (2) Apply CXCL9 filter
  • (-) Remove SIVmac239 filter SIVmac239 (2)
  • TGF-b (2) Apply TGF-b filter
  • Ifnγ (2) Apply Ifnγ filter
  • MCP-1 (1) Apply MCP-1 filter
  • CD68 (1) Apply CD68 filter
  • CCL5 (1) Apply CCL5 filter
  • Il10 (1) Apply Il10 filter
  • CTLA4 (1) Apply CTLA4 filter
  • Ccl2 (1) Apply Ccl2 filter
  • CXCR4 (1) Apply CXCR4 filter
  • CD19 (1) Apply CD19 filter
  • Prdm1 (1) Apply Prdm1 filter
  • Rorc (1) Apply Rorc filter
  • Gzmb (1) Apply Gzmb filter
  • IL4 (1) Apply IL4 filter
  • MYC (1) Apply MYC filter
  • NCR1 (1) Apply NCR1 filter
  • TCF7 (1) Apply TCF7 filter
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  • il11ra (1) Apply il11ra filter
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Product

  • RNAscope 2.5 HD Red assay (1) Apply RNAscope 2.5 HD Red assay filter

Research area

  • Infectious Disease (2) Apply Infectious Disease filter
  • HIV (1) Apply HIV filter
  • Inflammation (1) Apply Inflammation filter
  • Neuroscience (1) Apply Neuroscience filter

Category

  • Publications (2) Apply Publications filter
CD4 T cells are rapidly depleted from tuberculosis granulomas following acute SIV co-infection

Cell reports

2022 May 31

Foreman, TW;Nelson, CE;Kauffman, KD;Lora, NE;Vinhaes, CL;Dorosky, DE;Sakai, S;Gomez, F;Fleegle, JD;Parham, M;Perera, SR;Lindestam Arlehamn, CS;Sette, A;Tuberculosis Imaging Program, ;Brenchley, JM;Queiroz, ATL;Andrade, BB;Kabat, J;Via, LE;Barber, DL;
PMID: 35649361 | DOI: 10.1016/j.celrep.2022.110896

HIV/Mycobacterium tuberculosis (Mtb) co-infected individuals have an increased risk of tuberculosis prior to loss of peripheral CD4 T cells, raising the possibility that HIV co-infection leads to CD4 T cell depletion in lung tissue before it is evident in blood. Here, we use rhesus macaques to study the early effects of simian immunodeficiency virus (SIV) co-infection on pulmonary granulomas. Two weeks after SIV inoculation of Mtb-infected macaques, Mtb-specific CD4 T cells are dramatically depleted from granulomas, before CD4 T cell loss in blood, airways, and lymph nodes, or increases in bacterial loads or radiographic evidence of disease. Spatially, CD4 T cells are preferentially depleted from the granuloma core and cuff relative to B cell-rich regions. Moreover, live imaging of granuloma explants show that intralesional CD4 T cell motility is reduced after SIV co-infection. Thus, granuloma CD4 T cells may be decimated before many co-infected individuals experience the first symptoms of acute HIV infection.
Central Nervous System Inflammation and Infection During Early, Non-Accelerated Simian-Human Immunodeficiency Virus Infection in Rhesus Macaques.

J Virol.

2018 Mar 21

Hsu DC, Sunyakumthorn P, Wegner M, Schuetz A, Silsorn D, Estes JD, Deleage C, Tomusange K, Lakhashe SK, Ruprecht RM, Lombardini E, Im-Erbsin R, Kuncharin Y, Phuang-Ngern Y, Inthawong D, Chuenarom W, Burke R, Robb ML, Ndhlovu LC, Ananworanich J, Valcour V,
PMID: 29563297 | DOI: 10.1128/JVI.00222-18

Studies utilizing highly pathogenic simian immunodeficiency virus (SIV) and simian-human immunodeficiency virus (SHIV) have largely focused on the immunopathology of the central nervous system (CNS) during end-stage neuro AIDS and SIV encephalitis. However, this may not model pathophysiology in earlier stages of infection. In this non-accelerated SHIV model, plasma SHIV RNA levels and peripheral blood and colonic CD4 T+ cell counts mirrored early HIV infection in humans. At 12 weeks post infection, cerebrospinal fluid (CSF) detection of SHIV RNA and elevations in IP-10 and MCP-1 reflected a discrete neurovirologic process. Immunohistochemical staining revealed a diffuse, low-level CD3+, CD4- cellular infiltrate in the brain parenchyma, without a concomitant increase in CD68/CD163+ monocytes, macrophages and activated microglial cells. Rare SHIV-infected cells in the brain parenchyma and meninges were identified by RNAscope®in situhybridization. In the meninges, there was also a trend toward increased CD4+ infiltration in SHIV-infected animals, but no differences in CD68/CD163+ cells between SHIV-infected and uninfected control animals. These data suggest that in a model that closely recapitulates human disease, CNS inflammation and SHIV in CSF may be predominantly mediated by T-cell mediated processes during early infection in both brain parenchyma and meninges. Because SHIV expresses an HIV rather than SIV envelope, this model could inform studies to understand potential HIV cure strategies targeting the HIV envelope.IMPORTANCE Animal models of the neurologic effects of HIV are needed because brain pathology is difficult to assess in humans. Many current models focus on the effects of late stage disease utilizing simian immunodeficiency virus (SIV). In the era of antiretroviral therapy, manifestations of late stage HIV are less common. Furthermore, new interventions such as monoclonal antibodies and therapeutic vaccinations target HIV envelope. We therefore describe a new model of central nervous system involvement in rhesus macaques infected with simian-human immunodeficiency virus (SHIV) expressing HIV envelope in earlier, less aggressive stages of disease. Here, we demonstrate that SHIV mimics the early clinical course in humans, and that early neurologic inflammation is characterized by predominantly T cell mediated inflammation, accompanied by SHIV infection in the brain and meninges. This model can be utilized to assess the effect of novel therapies targeted to HIV envelope on reducing brain inflammation before end stage disease.

X
Description
sense
Example: Hs-LAG3-sense
Standard probes for RNA detection are in antisense. Sense probe is reverse complent to the corresponding antisense probe.
Intron#
Example: Mm-Htt-intron2
Probe targets the indicated intron in the target gene, commonly used for pre-mRNA detection
Pool/Pan
Example: Hs-CD3-pool (Hs-CD3D, Hs-CD3E, Hs-CD3G)
A mixture of multiple probe sets targeting multiple genes or transcripts
No-XSp
Example: Hs-PDGFB-No-XMm
Does not cross detect with the species (Sp)
XSp
Example: Rn-Pde9a-XMm
designed to cross detect with the species (Sp)
O#
Example: Mm-Islr-O1
Alternative design targeting different regions of the same transcript or isoforms
CDS
Example: Hs-SLC31A-CDS
Probe targets the protein-coding sequence only
EnEmProbe targets exons n and m
En-EmProbe targets region from exon n to exon m
Retired Nomenclature
tvn
Example: Hs-LEPR-tv1
Designed to target transcript variant n
ORF
Example: Hs-ACVRL1-ORF
Probe targets open reading frame
UTR
Example: Hs-HTT-UTR-C3
Probe targets the untranslated region (non-protein-coding region) only
5UTR
Example: Hs-GNRHR-5UTR
Probe targets the 5' untranslated region only
3UTR
Example: Rn-Npy1r-3UTR
Probe targets the 3' untranslated region only
Pan
Example: Pool
A mixture of multiple probe sets targeting multiple genes or transcripts

Enabling research, drug development (CDx) and diagnostics

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